commit 7bce87dd08c52eb598c34655b0a1a4cb362610f0
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sun Jan 13 11:31:55 2008 +0100

    comment grammar fixes

commit 7813402cb08330852d1d09e3451295beb38c4b03
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sun Jan 13 11:28:59 2008 +0100

    bug fix: allow the full range of sz for fixed z

commit 8a721456d92a404c3d7446da4d7f91551300ef4b
Author: Jochen Voss <voss@seehuhn.de>
Date:   Fri Jan 11 12:10:37 2008 +0100

    deal with truncation errors in Q_KS

commit 1ad833f70b3436454374a2b434cf9f78bfe89075
Author: Jochen Voss <voss@seehuhn.de>
Date:   Fri Jan 11 10:21:02 2008 +0100

    cosmetic fixes: replace a few forgotten "terr" with "t0"

commit 19b785ba04bf68e83c0f4b0ebf08b856d3d64a1b
Author: Jochen Voss <voss@seehuhn.de>
Date:   Mon Dec 10 17:54:41 2007 +0000

    prepare for fast-dm release 28

commit 8413761ab2672f5442cecfb1de2486ef75855f9e
Author: Jochen Voss <voss@seehuhn.de>
Date:   Mon Dec 10 17:39:33 2007 +0000

    Choose new tuning parameters for set_precision.

    The automatic tuning of discretisation parameters reacted to a bug in
    the t0-integration by choosing very small step sizes in some
    directions.  Now that the bug is removed, the "optimal" step sizes
    transpire to be bigger, leading to speed improvements for high
    precisions.

commit 9f49655fc608d1a1d8e186ca18244e5d1f6d5f63
Author: Jochen Voss <voss@seehuhn.de>
Date:   Mon Dec 10 17:33:02 2007 +0000

    update the parameter tuning scripts

commit 45af4227d75f48b38a0a9188042bfc03f43bfb8d
Author: Jochen Voss <voss@seehuhn.de>
Date:   Thu Dec 6 22:59:13 2007 +0000

    check for invalid parameters

commit c03ea10b299696d75c434d6a25d08ad6f04de259
Author: Jochen Voss <voss@seehuhn.de>
Date:   Mon Dec 3 20:51:16 2007 +0000

    cosmetic fixes

commit 3e2bf62fea02cd436c0da0e682e5bf970ff70568
Author: Jochen Voss <voss@seehuhn.de>
Date:   Mon Dec 3 20:51:11 2007 +0000

    bug fix for the t-integration for small st0

commit 33ede76797ce2a37c7b977e093b243e6bc622e4d
Author: Jochen Voss <voss@seehuhn.de>
Date:   Mon Dec 3 12:09:44 2007 +0000

    cosmetic fixes

commit f2408d1e98b02918021b8bef729a94eb0f9b561e
Author: Jochen Voss <voss@seehuhn.de>
Date:   Thu Nov 29 14:53:36 2007 +0000

    construct-samples: fix a typo in the help message

commit 22b6c2cf12811b38cd57b85cfb3cc69a16287ae3
Author: Jochen Voss <voss@seehuhn.de>
Date:   Fri Nov 23 11:00:51 2007 +0000

    remove obsolete files

commit c62ffada8d1f6caa46c1630efa8a7d8d8fb93788
Author: Jochen Voss <voss@seehuhn.de>
Date:   Thu Nov 22 13:24:47 2007 +0000

    prepare for fast-dm release 27

commit 4d8f7506cc61a31bb879b4878bd8180085ddda0a
Author: Jochen Voss <voss@seehuhn.de>
Date:   Mon Nov 19 10:48:56 2007 +0000

    construct-samples: protect against rounding errors

commit b6f8b8ce82e1361e6f4dbf81ab72d6629c295022
Author: Jochen Voss <voss@seehuhn.de>
Date:   Fri Nov 16 14:34:57 2007 +0000

    fix an integer overflow

commit 0500c56a336e8abbd8244bc8d23357cd7d7411e0
Author: Jochen Voss <voss@seehuhn.de>
Date:   Thu Nov 15 22:48:08 2007 +0000

    Clean up library use, use BLAS if available.

commit b0e40ff77440b1cf4c2b19986c4ef6c18c14dd93
Author: Jochen Voss <voss@seehuhn.de>
Date:   Thu Nov 15 22:20:26 2007 +0000

    cosmetic fixes

commit 3e096950e2a61166516f3934997640457b244062
Author: Jochen Voss <voss@seehuhn.de>
Date:   Thu Nov 15 21:29:25 2007 +0000

    minor optimisation for F_st_get_F

commit 2a77529d8172dae9253b5c2783faea6264fdbc26
Author: Jochen Voss <voss@seehuhn.de>
Date:   Thu Nov 15 20:04:45 2007 +0000

    bug fix: sometimes the t-integration did not work correctly for st0>0

commit de306e5da3f9515a70b714675433a9f3fbd9f8b5
Author: Jochen Voss <voss@seehuhn.de>
Date:   Wed Nov 14 12:28:16 2007 +0000

    doc fixes

commit c51748a437d0b153f6b42984779fe18d7aa51651
Author: Jochen Voss <voss@seehuhn.de>
Date:   Tue Nov 13 14:12:26 2007 +0000

    construct-samples: include the sample size into the information file

commit 8eb2b55c5221d0e0a72d8bbd0b7648f9e405ba8a
Author: Jochen Voss <voss@seehuhn.de>
Date:   Tue Nov 13 14:08:44 2007 +0000

    fast-dm: minor fixes

commit 55e35d68b1659976fe218d5faa5fdbc2d48903a5
Author: Jochen Voss <voss@seehuhn.de>
Date:   Fri Oct 26 14:31:06 2007 +0100

    Write the construct-samples parameter file after generating the data.
    This reduces the chance of spurios parameter files lying around.

commit dade51ae2a9a6b1ad9cc651b1b83557016992eac
Author: Jochen Voss <voss@seehuhn.de>
Date:   Thu Oct 25 22:51:16 2007 +0100

    update the NEWS file

commit a5b528326ead0eb6f2df9247458be739b9b2f967
Author: Jochen Voss <voss@seehuhn.de>
Date:   Thu Oct 25 22:39:13 2007 +0100

    fast-dm: implement continue mode via '-c' command line option

commit 30494197a429b77b3d09e2951f5b10ebf071e55f
Author: Jochen Voss <voss@seehuhn.de>
Date:   Thu Oct 25 21:51:38 2007 +0100

    make construct-samples more user friendly

commit 59de5d6d9ba94065102a8823a6e1d5c90637a3e7
Author: Jochen Voss <voss@seehuhn.de>
Date:   Wed Sep 26 13:09:02 2007 +0100

    fix a corner case in find_best_log_p

commit eae6f55abf34581607fa36a1e8f72162ca6eabe1
Author: Jochen Voss <voss@seehuhn.de>
Date:   Thu Oct 25 20:16:30 2007 +0100

    minor fixes to the contact information

commit 84b29b0e980fb151f31fe9239a080bdbd5b2382d
Author: Jochen Voss <voss@seehuhn.de>
Date:   Thu Oct 25 20:12:53 2007 +0100

    Move everything KS specific into the new source file method-ks.c.

    This rearrangement of code makes the structure of the program clearer.
    Is also allows to experiment with different optimisation criteria
    more easily.

commit 2bd1f1ec055f5db54b41521a25631cdf195e5027
Author: Jochen Voss <voss@seehuhn.de>
Date:   Thu Oct 25 19:41:34 2007 +0100

    Move 'samples_name' into 'struct sample'.

commit 9e1e8f1bcbf6f059bf75c662bc810b45f2736b72
Author: Jochen Voss <voss@seehuhn.de>
Date:   Thu Oct 25 19:01:13 2007 +0100

    MANUAL: fix a typo

commit fbafbb0794e99b20acc40a071aa137955946f18f
Author: Jochen Voss <voss@seehuhn.de>
Date:   Fri Sep 21 11:31:40 2007 +0100

    experiment.c: minor fixes

commit 3e55c4dc4763ca8b8b7e47167320711d6e9c41a6
Author: Jochen Voss <voss@seehuhn.de>
Date:   Thu Sep 20 22:51:18 2007 +0100

    dataset.c: minor doc fix

commit 47add2a270cdbd44b2454fa0a0247df511038f41
Author: Jochen Voss <voss@seehuhn.de>
Date:   Mon Jun 4 10:03:04 2007 +0100

    fast-dm/main.c: remove some unnecessary brackets

commit bf1f71057b92f2fa5e4cb1130de34cd5c974f999
Author: Jochen Voss <voss@seehuhn.de>
Date:   Tue May 15 00:13:28 2007 +0100

    MANUAL: fix a typo

commit aff099ddef2533c370ea3507dc1ab004921cad94
Author: Jochen Voss <voss@seehuhn.de>
Date:   Mon May 14 23:36:40 2007 +0100

    white space fixes

commit 316617bf6a24f9ddb850b12cfbf5524884bfcce6
Author: Jochen Voss <voss@seehuhn.de>
Date:   Tue Mar 13 12:44:38 2007 +0000

    fast-dm/main.c: bug fix

    Add a missing test to see whether a fixed value of z is compatible
    with the current value of sz.

commit e42763084a01009bef60d6780a63d8a19700f2cc
Author: Jochen Voss <voss@seehuhn.de>
Date:   Fri Mar 9 11:20:24 2007 +0000

    fast-dm release 26

commit 1a60e29053c3f91d3ae9cf5d261c43c5548487e9
Author: Jochen Voss <voss@seehuhn.de>
Date:   Thu Mar 1 00:23:15 2007 +0000

    minor fixes

commit 5217c724da3ab1eb5746e87371617b7b5b8a7e53
Author: Jochen Voss <voss@seehuhn.de>
Date:   Wed Feb 28 23:59:02 2007 +0000

    New implementation of tune-local.

commit c6a93434be739e4d794b64fc28b69e96950b3232
Author: Jochen Voss <voss@seehuhn.de>
Date:   Wed Feb 28 23:43:39 2007 +0000

    tune-local.c: consider all parameters again

commit 0018c17dd0ff7ef68fc3a9e0ca3ccf5336bdf6a0
Author: Jochen Voss <voss@seehuhn.de>
Date:   Tue Feb 27 14:28:39 2007 +0000

    new prerelase version 25.90

commit d81b3f1ca3081c0f36c218841ab903997e6ad441
Author: Jochen Voss <voss@seehuhn.de>
Date:   Tue Feb 27 14:26:32 2007 +0000

    cdf.c: new discretisation parameter values

commit 960fcd4fbd0479fad424b02402e0defc02277b65
Author: Jochen Voss <voss@seehuhn.de>
Date:   Wed Feb 21 15:15:44 2007 +0000

    fast-dm: rename old TUNE_DTERR to new TUNE_DT0

commit f831e2020dfdd263a5822f1098a583cc6deda7a7
Author: Jochen Voss <voss@seehuhn.de>
Date:   Tue Feb 20 22:03:41 2007 +0000

    fast-dm/pde2.c: new file (currently unused)

    This is an alternative implementation of the PDE solver, which does
    the LU factorisation only once and then uses this repeatedly.
    Unfortunately the code is slower than the old version in pde.c.

commit 2f2d4875d6db19e4c29032f7a715310a046c9caa
Author: Jochen Voss <voss@seehuhn.de>
Date:   Tue Feb 20 21:18:09 2007 +0000

    pde.c: minor speed optimisations in solve_tridiag()

commit 768ef4157a3097aa8dfe41367dd5bf83a30ab996
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sun Feb 18 23:24:17 2007 +0000

    fast-dm/tune-params.c: switch to use simplex2, start tuning again

commit 29727535db124b5d92deed88187dc38cce9232db
Author: Jochen Voss <voss@seehuhn.de>
Date:   Mon Jan 22 17:04:10 2007 +0000

    fast-dm release 25

commit b7918cbf7451894b9e157042c452ffdf13103195
Author: Jochen Voss <voss@seehuhn.de>
Date:   Mon Jan 22 16:58:43 2007 +0000

    fast-dm/main.c: fix the default initial value for sv

commit e9e73dd4c7578a462ff9dd81703f43eb6753ed8f
Author: Jochen Voss <voss@seehuhn.de>
Date:   Thu Jan 18 13:58:39 2007 +0000

    prepare for fast-dm release 25

commit 8b7e75420f1046d682b71bac92027ab59af24e2d
Author: Jochen Voss <voss@seehuhn.de>
Date:   Thu Jan 18 13:54:28 2007 +0000

    main.c: use new default values for the optimisation

commit b9b3a715ed45de429384071cc03bbb1124d74083
Author: Jochen Voss <voss@seehuhn.de>
Date:   Tue Jan 16 19:16:35 2007 +0000

    simplex2.c: fiddle a bit more with the simplex algorithm

commit 9f5ccaa1af36c19404ff15212d9c5eddcf3ed90f
Author: Jochen Voss <voss@seehuhn.de>
Date:   Tue Jan 16 13:51:23 2007 +0000

    use the new simplex2 function for fast-dm

commit e563246986b2a9aa26254e3f1d91b633f9d71e53
Author: Jochen Voss <voss@seehuhn.de>
Date:   Tue Jan 16 13:22:16 2007 +0000

    simplex2.c: faithfully implement the simplex variant from numerical receipes

    This changes the mechanism for the acceptance of reflections and extended
    reflections slightly to exactly reflect the description at
    http://www.research.ibm.com/infoecon/paps/html/amec99_bundle/node8.html

commit 93be2f837a39f8a8db4edd310df8d3a40b9df445
Author: Jochen Voss <voss@seehuhn.de>
Date:   Tue Jan 16 12:37:53 2007 +0000

    Add a new simplex implementation with 2-valued objective function.

    The new simplex method uses lexicographical ordering, i.e. a value
    (a1,a2) is considered bettter than (b1,b2) if either a1<b1 or if a1=b1
    and a2<b2.  This allows a cleaner implementation of the penalties for
    invalid parameter values.

commit a18ba82c2766fa60fecef049119ff8ba45b091eb
Author: Jochen Voss <voss@seehuhn.de>
Date:   Tue Jan 16 12:33:35 2007 +0000

    xmalloc.c: remove unused include statement

commit 50d12a77ebf8674cc1b1680f68e24208d575f560
Author: Jochen Voss <voss@seehuhn.de>
Date:   Tue Jan 16 12:33:00 2007 +0000

    simplex.c: minor bug fix

commit 6c106550621e3e4b8552ee555491c98745bf2c7f
Author: Jochen Voss <voss@seehuhn.de>
Date:   Mon Nov 27 21:59:22 2006 +0000

    fast-dm release 24

commit d1b85aa0fe853edd7ef7a9ee73cc68c805e4a26b
Author: Jochen Voss <voss@seehuhn.de>
Date:   Mon Nov 27 21:54:31 2006 +0000

    Don't abort the whole run on encountering an invalid data file.

    experiment.c (experiment_get_dataset): if an error in a data file is
    found, just emit a message and try the next file instead.

    file.c: new function 'file_message' to emit non-fatal error messages.

commit 7a3a45d8410251aa16c0ab0d3678e6a56007d156
Author: Jochen Voss <voss@seehuhn.de>
Date:   Mon Nov 27 21:51:57 2006 +0000

    TODO: simplex fails for less than 2 variables

commit 1a39ae5acb0a037cf405c67fda87c90084125bfb
Author: Jochen Voss <voss@seehuhn.de>
Date:   Mon Nov 27 21:51:11 2006 +0000

    main.c: give CPU time only up to 0.1 seconds

commit 44bde76928f1c5a69c7ec0870dc2ba8795326314
Author: Jochen Voss <voss@seehuhn.de>
Date:   Wed Nov 22 09:07:05 2006 +0000

    fast-dm/experiment.c: add missing newline after warning message

commit 49831cba5ed0121733494f717a755faa6d84fced
Author: Jochen Voss <voss@seehuhn.de>
Date:   Tue Nov 21 10:56:31 2006 +0000

    Rearrange the directory structure.

    Move old pde/src/ to new fast-dm/.
    Move old pde/tex/ to new pde/VV06/.
    New directory pde/VV06b/.

commit 1ccfa38973739fa3a4f78950b4001f2fe29c609e
Author: Jochen Voss <voss@seehuhn.de>
Date:   Thu Nov 16 21:46:16 2006 +0000

    Fast-dm release 23.

    This is the fast-dm version described in the article "Fast-dm: A Free
    Program for Efficient Diffusion Model Analysis".  Changes include:

    * update the ChangeLog and NEWS files
    * update the MANUAL
    * swap the names of the "log" and "save" commands

commit 210eb9e15d44e2b94afd44dbb451d7d65587a324
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sun Nov 12 21:21:17 2006 +0000

    pde/src/MANUAL: minor fixes

commit 384c8d2cc2fa31b585ae0b00fc988e3d0ff2aa05
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sun Nov 12 16:29:19 2006 +0000

    construct-samples.c: allow to construct several samples in one run

commit 43f97d9c6040405c5ad5c88d51920a5ac131c421
Author: Jochen Voss <voss@seehuhn.de>
Date:   Fri Nov 10 18:20:05 2006 +0000

    minor fixes

commit ba9a8cd2e5fe8f864549c7c85525e6a0fa23d8e1
Author: Jochen Voss <voss@seehuhn.de>
Date:   Fri Nov 10 18:19:50 2006 +0000

    dataset.c: new function dataset_print_commands

commit ed5b1d99b40e685acde0752f494af6fc6203677f
Author: Jochen Voss <voss@seehuhn.de>
Date:   Fri Nov 10 15:24:47 2006 +0000

    experiment.c: allow 1 as the new minimal precision

commit f418c2e9280fce4e1c02174cc54cfab02a701b70
Author: Jochen Voss <voss@seehuhn.de>
Date:   Fri Nov 10 15:14:19 2006 +0000

    experiment.c: allow 1 as the new minimal precision

commit 0ec0603a4708f05b2110470ba0263a60451bf1a7
Author: Jochen Voss <voss@seehuhn.de>
Date:   Fri Nov 10 15:12:00 2006 +0000

    main.c: add a free version of T_to_p

commit 97bc03f389eb527d6454e1d87c968c9ed06a523f
Author: Jochen Voss <voss@seehuhn.de>
Date:   Fri Nov 10 13:47:07 2006 +0000

    fast-dm release 22

commit fb7b24bbc38591611aa814d829c5eebd5a1c01cd
Author: Jochen Voss <voss@seehuhn.de>
Date:   Fri Nov 10 13:36:10 2006 +0000

    tab2.ctl: slightly higher precision, write a summary

commit c8261567fdb31d0723249290477367723a81525f
Author: Jochen Voss <voss@seehuhn.de>
Date:   Fri Nov 10 13:34:48 2006 +0000

    experiment.c: use nicer headings for the summary file

commit 62a9013ebdb3003111651bc919062ab6e5d4a1f4
Author: Jochen Voss <voss@seehuhn.de>
Date:   Fri Nov 10 13:31:33 2006 +0000

    main.c: new implementation of T_to_p

commit ac037302e3e2c075be641d467b4b545a735787a9
Author: Jochen Voss <voss@seehuhn.de>
Date:   Fri Nov 10 13:15:27 2006 +0000

    TODO: one item done

commit e14f5da872e3489b98780352b585e234d615bbaa
Author: Jochen Voss <voss@seehuhn.de>
Date:   Fri Nov 10 12:22:10 2006 +0000

    misc. fixes and clean-ups

commit 5da0fe4881dfef87e165bfaf146eaff2e3d7e6a1
Author: Jochen Voss <voss@seehuhn.de>
Date:   Wed Nov 8 17:06:50 2006 +0000

    use * instead of %d in file name templates

commit dfb1f299aecdd4297369d73405acd50d22772ec5
Author: Jochen Voss <voss@seehuhn.de>
Date:   Wed Nov 8 15:09:46 2006 +0000

    files.c: new file (get data file names)

commit efc2024b214b9aa02430573bd8b734c33d166ee5
Author: Jochen Voss <voss@seehuhn.de>
Date:   Wed Nov 8 15:08:43 2006 +0000

    container.c: new function 'array_sort'

commit 5a970248aae213127ffbaee556e5034bf854178d
Author: Jochen Voss <voss@seehuhn.de>
Date:   Wed Nov 8 15:08:20 2006 +0000

    xmalloc.c: new function 'xstrndup'

commit 23db2d1a6419db87bd44ef163bfc93874d69025d
Author: Jochen Voss <voss@seehuhn.de>
Date:   Wed Nov 8 13:08:34 2006 +0000

    Update the MS Windows compatibility hacks.

    New files "win32dir.c" and "win32dir.h", containing a dirent
    implementation for MS Windows.

    Rename old "erc.c" to new "win32erf.c" for consistency.

commit efe053b581bafbbd796502a40123b99c7d9056ac
Author: Jochen Voss <voss@seehuhn.de>
Date:   Mon Nov 6 12:54:20 2006 +0000

    prepare for fast-dm release 19

commit d67ce1090f16f1d044df1a99f49ff9ab62fa4660
Author: Jochen Voss <voss@seehuhn.de>
Date:   Wed Nov 1 13:45:50 2006 +0000

    Makefile.am: add a dependency to "jvrandom.h"

commit 2f8eb25a35a8e15496bd0f147f4144eb71dd857f
Author: Jochen Voss <voss@seehuhn.de>
Date:   Wed Nov 1 13:45:14 2006 +0000

    construct-samples.c: allow to generate random samples as well as regular ones

    The new command line option "-r" generates randomised samples.
    Without "-r" the programm still generates regular samples from the
    1/N-quantiles of the distribution.

    Also fix the "-p" (precision) option and clean up the code.

commit 77df65709c7f482604f5e2d16a30e34b1e431d97
Author: Jochen Voss <voss@seehuhn.de>
Date:   Wed Nov 1 13:42:50 2006 +0000

    experiment.c: cosmetic fix

commit e1d80b841d307a773b90e770f9def94130961387
Author: Jochen Voss <voss@seehuhn.de>
Date:   Mon Oct 30 11:33:56 2006 +0000

    pde/src/compare: new target (compare results with Joachim)

commit 319e8d29a5b8531a2ce9221c8db66511e266e767
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sun Oct 29 19:34:23 2006 +0000

    prepare for fast-dm release 18

commit c24071f3ccf04a3b3523f6713212bb94bceaf023
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sun Oct 29 19:26:51 2006 +0000

    Allow to fix the parameter "z".

commit e84b7f8256f0c0ee3ad231a01f7adf772aa98664
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sun Oct 29 18:20:18 2006 +0000

    pde/src/main.c: fix logic error in find_best_log_p

commit c622553c246a540311fa7dbfe73cf2a364879681
Author: Jochen Voss <voss@seehuhn.de>
Date:   Mon Oct 16 20:26:27 2006 +0100

    prepare for fast-dm release 17

commit 7e81b8b3437863f3e7f99668d4c450d89128e241
Author: Jochen Voss <voss@seehuhn.de>
Date:   Mon Oct 16 20:24:54 2006 +0100

    Continue the code review for the file "main.c".

    Minor bug fix in 'find_best_log_p'.
    Clean up the code, new function 'KS_get_z'.

commit 12a24c8eb509a570c02a291e279a1fe6c1e091eb
Author: Jochen Voss <voss@seehuhn.de>
Date:   Tue Oct 10 20:53:14 2006 +0100

    fast-dm release 16

commit 33358457ab2fa3d825ac91e4a71962e899f2c427
Author: Jochen Voss <voss@seehuhn.de>
Date:   Tue Oct 10 20:51:33 2006 +0100

    fast-dm: minor fixes

commit 6321c591fa184c70608b168caeee2e6f7a825908
Author: Jochen Voss <voss@seehuhn.de>
Date:   Tue Oct 10 20:49:38 2006 +0100

    fast-dm: add a manual, minor fixes

    The new file MANUAL contains beginnings of the Fast-DM Users' guide.

    Also I started the code review of the file "main.c": there are some
    more comments now, and the code is simplified and cleaned up a bit.

commit 80fa71ad758238b6c1df25c5e1e533837e8260ac
Author: Jochen Voss <voss@seehuhn.de>
Date:   Tue Oct 10 10:28:59 2006 +0100

    pde/src/main.c: ignore missing data sets.

commit edfce3f53402946cf50f505f9a1543b8d3412b21
Author: Andreas Voss <Andreas.Voss@psychologie.uni-freiburg.de>
Date:   Sun Oct 8 13:11:27 2006 +0200

    pde/src/main.c: fix freeing of the KS_stat structures

commit 67845c8cf5d3800aeb0dd8586f9f0fab0188df85
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sat Oct 7 18:28:34 2006 +0100

    fast-dm release 15

commit d0fa1eee22095a27ccbf3d35db08b09c3c30abb8
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sat Oct 7 18:23:45 2006 +0100

    Continue the fast-dm code review.

    Review of "experiment.c" is finished, some fixes in "main.c" started.

commit e1fdf9c1d1c992053c414fab2805b1c43ff19d6c
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sat Oct 7 14:06:38 2006 +0100

    First part of a code review.

    Do a code review of "dataset.c" (complete) and "experiment.c" (partial).
    Clean up the code, fix another memory leak, rename some functions, ...

commit 4a7b1877bcbe199cfc08b0f3e51445c9df4a91fb
Author: Andreas Voss <Andreas.Voss@psychologie.uni-freiburg.de>
Date:   Fri Oct 6 15:44:30 2006 +0200

    minor fixes

commit 1a99e25147780e946486faa660521551bfedc575
Author: Jochen Voss <voss@seehuhn.de>
Date:   Fri Oct 6 11:38:13 2006 +0100

    tune-params: major updates

commit 46a8bb6db5877d3258bcff60df99933469d425da
Author: Jochen Voss <voss@seehuhn.de>
Date:   Fri Oct 6 11:36:55 2006 +0100

    plot-cdf: minor fix

commit 1a82c0a717a2ab7d9e45cab295c99e08e62ece2c
Author: Jochen Voss <voss@seehuhn.de>
Date:   Fri Oct 6 11:36:05 2006 +0100

    construct-samples: add -p command line option

commit 2072d0374b2aabcd56b4907b0895c7e6cd7be1db
Author: Andreas Voss <Andreas.Voss@psychologie.uni-freiburg.de>
Date:   Fri Oct 6 11:29:07 2006 +0200

    fix two memory leaks

commit 451beb2f629f7e09b01439b4a4b2a0d060c7c9ac
Author: Andreas Voss <Andreas.Voss@psychologie.uni-freiburg.de>
Date:   Thu Oct 5 11:26:34 2006 +0200

    minor fixes

commit 0665778c1e9f86f322448694c363795b023cc113
Author: Jochen Voss <voss@seehuhn.de>
Date:   Wed Oct 4 21:40:03 2006 +0100

    fast-dm release 14

commit c3aa0539efe1a5297fcf64a1a742ddccb0314fa4
Author: Jochen Voss <voss@seehuhn.de>
Date:   Wed Oct 4 20:31:58 2006 +0100

    fast_dm: major clean-up

commit c468d7f3dee7bd3aeef6d1b025399a60811010ed
Author: Jochen Voss <voss@seehuhn.de>
Date:   Wed Oct 4 18:08:57 2006 +0100

    compilation fixes

commit 3287dabccc064a065ac7e8a1d5ba3ceff230215c
Merge: ba6439c... e28b2e0...
Author: Jochen Voss <voss@seehuhn.de>
Date:   Wed Oct 4 17:15:28 2006 +0100

    Merge branch 'master' into save

    Conflicts:

    	pde/src/experiment.c
    	pde/src/main.c

commit ba6439cb41090379d1a0833cff02e5151df59374
Author: Andreas Voss <Andreas.Voss@psychologie.uni-freiburg.de>
Date:   Wed Oct 4 11:11:54 2006 +0200

    fast-dm: first complete implementation of the save command

commit e28b2e07b46ace07604de93dd380b78c03b33270
Author: Jochen Voss <voss@seehuhn.de>
Date:   Fri Sep 29 18:40:03 2006 +0100

    Allow to set the precision in the control file.

commit aa6d831bf6e0f54682b1a8e5e8252325d3bb406d
Author: Jochen Voss <voss@seehuhn.de>
Date:   Fri Sep 29 18:24:30 2006 +0100

    main.c: Fix the return value of 'find_best_log_p'

commit f8f6470c0dfa4fa107315f95e151fecfc693bb0f
Author: Jochen Voss <voss@seehuhn.de>
Date:   Fri Sep 29 18:21:24 2006 +0100

    Initial support for global save files.

commit 7162a6330946a15cc68256ae9bad92e91535ba59
Author: Jochen Voss <voss@seehuhn.de>
Date:   Fri Sep 29 01:26:06 2006 +0100

    pde/src/cdf.c: set_precision: better parameter values.

    The new values in set_precision are obtained by new numerical
    experiments, using tune-params.  The values seem to work at least for
    precisions between 2 und 4.

commit 68f4b6b8757cae11f515b68185e95f1fee8b62ed
Merge: f67159b... ca70d18...
Author: Jochen Voss <voss@seehuhn.de>
Date:   Thu Sep 28 17:20:21 2006 +0100

    Merge branch 'master' of voss@seehuhn.de:/srv/git/bruder

commit f67159baeada9864a685d7e84cd99a2f9288c176
Author: Jochen Voss <voss@seehuhn.de>
Date:   Thu Sep 28 17:20:14 2006 +0100

    fast-dm: allow to set the precision at run-time

commit ca70d186458a2ab37ef894adbb3722851fe62492
Author: Andreas Voss <Andreas.Voss@psychologie.uni-freiburg.de>
Date:   Fri Sep 15 14:51:37 2006 +0200

    pde/src/main.c: implement handling of experimental conditions

commit 80f4e934f73554aa9d70bf7a9240623cad5d8b6b
Author: Jochen Voss <voss@seehuhn.de>
Date:   Wed Sep 27 21:14:40 2006 +0100

    pde/src/xx.py: read the precision value from the command line.

commit 8b212657381ff2dd6e98ed93a695f4e7a17fc053
Author: Jochen Voss <voss@seehuhn.de>
Date:   Wed Sep 27 21:56:10 2006 +0200

    fast-dm: additional comments and assorted fixes

commit 3e955b9466d40989b7e4b23137ce0b61079853db
Author: Jochen Voss <voss@seehuhn.de>
Date:   Tue Sep 26 18:36:39 2006 +0200

    prepare for fast-dm release 11

commit 048df0587f6fc9eaa0c4d4efef78ed3fe2ed8755
Author: Jochen Voss <voss@seehuhn.de>
Date:   Tue Sep 26 18:32:27 2006 +0200

    fast-dm: assorted fixes

    Add some descriptions for global functions written by Andreas.
    Use _snprintf instead of snprintf on Windows.
    Make 'file_error' behave like fprintf and use this to get
    better error messages.

commit 071f96ce20bf872946d508e5eb69478674c344b0
Author: Jochen Voss <voss@seehuhn.de>
Date:   Tue Sep 26 00:15:09 2006 +0200

    fast-dm: minor fixes

commit 9ba62ebab1239e013c16535ecd0354e87e048a1d
Author: Andreas Voss <Andreas.Voss@psychologie.uni-freiburg.de>
Date:   Mon Sep 25 15:17:48 2006 +0200

    pde/src/README: update description and MS Windows compilation instructions

commit 6b83f694f7daef1774ce33676c87586e465c78a1
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sun Sep 24 21:28:57 2006 +0200

    prepare for fast-dm release 10

commit d4ee029e4eb19d24197a7fc2d3ec35e2739ec378
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sun Sep 24 21:26:13 2006 +0200

    Complete the transition to experiment control files.

    This commit gets rid of the old "readdata.c" file.
    Fast-dm is now completely controlled by an experiment
    control file, recompilation is not normally necessary
    any more.

commit f887ea0fee577846400d8d7dcd85564039060415
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sun Sep 24 15:05:32 2006 +0200

    Continue the implentationh of experiment control files.

    xmalloc.c: new file, safe memory allocation

    dataset.c: new file, will replace the old readdata.c eventually.
    Most things are already moved over.

    experiment.c: add more code to construct a 'struct dataset' on reading
    a data file.

commit 2fedf58b8a58a9a6c2bde01441f1b70f4b2c5115
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sun Sep 24 00:45:27 2006 +0200

    pde/src/experiment.c: new file

commit b108dee7ae3f0bb6a8e184b119ec7d5c23447ebc
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sun Sep 24 00:43:24 2006 +0200

    pde/src/readdata.c: minor fix

commit da15ff286d718110a6d737631ac3dcb94c3eb54c
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sun Sep 24 00:42:57 2006 +0200

    pde/src/file.c: minor fixes

commit 43ebe116272c7d5fab0e5c36cb46087618f2ebf5
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sat Sep 23 18:06:38 2006 +0100

    rename old "pde.h" to new "fast-dm.h"

commit d32987ad94e0642cb1dbe32048a777c8a84a8bd7
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sat Sep 23 18:01:57 2006 +0100

    file.c: new file, read control and data files

    This patch introduces a new 'struct file' to represent a line-based
    input file.  "file.c" contains code to sequentially read the input lines
    and to break them into words.

commit 048a380d552f37f2ac52d592d30e8d78cf4a73f6
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sun Sep 17 00:36:17 2006 +0100

    finalise table 2 for the paper

commit 577bc1fbf9e4cb9deffbfb261434905b1d645043
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sat Sep 16 23:34:02 2006 +0100

    finalise table 1 for the paper

commit 74034f410bca4d6dfcc5a2350c9fc159de0d5bcc
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sat Sep 16 23:04:59 2006 +0100

    prepare for fast-dm release 9

commit 2c2d770b3b0b9d0a3c4428a2c9f86d6219c59e54
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sat Sep 16 22:31:43 2006 +0100

    prepare for generation of table 2 in the paper

commit 017567617f827cb0879d44561137de8256f56389
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sat Sep 16 20:33:15 2006 +0100

    pde/src/cdf.c: cosmetic fix

commit 8b82e4e293c6f2b11415c658e178273600e072e2
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sat Sep 16 20:23:10 2006 +0100

    Settle on a final set of tuning parameters for the paper.

commit e601e1ef323b310c97da88f0b40fb0b5a70c52d6
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sat Sep 16 20:22:08 2006 +0100

    pde/src/simplex.c: change the evaluation order of the initial simplex.

    Change the order of function evaluations for the initial simplex, so that
    the given base point is evaluated first.  Now you can abort the search even
    after the first function evaluation without loosing quality.

commit 4d67d279098ccd0d5fc36d723b46f23b50af4a48
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sat Sep 16 19:53:14 2006 +0100

    Generated the final "exact" data sets for table 1 of the paper.

commit c825a0dc01dd8a807fed1127c8f1d6e1d5ee9b4d
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sat Sep 16 19:15:19 2006 +0100

    pde/src/EZ-diff.c: bug fix, the case v=0 failed previously

commit 19cb2b042c69458c61a5845e1383d5b111263561
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sat Sep 16 03:02:03 2006 +0100

    work on the tuning parameter search

commit 9af4f19fcf4f5738f4b3b45c0e1f3acb4ecdfe5f
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sat Sep 16 00:23:47 2006 +0100

    pde/src/tune-params.c: improve the score function and also consider t0

commit cd0a2bcdffcc0e17b802a046ada1fb03530f12e8
Author: Jochen Voss <voss@seehuhn.de>
Date:   Fri Sep 15 22:28:14 2006 +0100

    Add .info files for the table 1 data.

commit ead9dba818dbedb740203fc34931480e3c6cbb15
Author: Jochen Voss <voss@seehuhn.de>
Date:   Fri Sep 15 22:23:28 2006 +0100

    Rename the data files for table 1.

commit 80ac50a4e5ff76003a382c6fdcbfa7faa560fdd4
Author: Jochen Voss <voss@seehuhn.de>
Date:   Fri Sep 15 22:15:22 2006 +0100

    pde/src/t1-analyse.sh: reflect changes in the TeX file

commit 30ee4c5f1bc5fb44c7e7273c819cd6672b3e0d61
Author: Jochen Voss <voss@seehuhn.de>
Date:   Fri Sep 15 17:34:45 2006 +0100

    pde/src/: regenerate fast-dm data files for table 1

commit e4d5f17c91530a766aae796be9190e9e11b1a9ff
Author: Jochen Voss <voss@seehuhn.de>
Date:   Fri Sep 15 17:25:57 2006 +0100

    pde/src/: regenerate data files for table 1

commit dca26c30fd940e3366544da4fcff7a312b7e3856
Author: Jochen Voss <voss@seehuhn.de>
Date:   Fri Sep 15 15:16:54 2006 +0100

    Change the default precision to 4 again.

commit 7bb8b698098520908ffaa4f43ee6fac132ed981b
Author: Jochen Voss <voss@seehuhn.de>
Date:   Fri Sep 15 15:15:34 2006 +0100

    Use a new set of parameters for the simulations in the paper.

commit f0c436a96f8b69f600065de29663b6905a86c90a
Author: Jochen Voss <voss@seehuhn.de>
Date:   Thu Sep 14 23:09:08 2006 +0100

    pde/src: add more stuff to generate table 1

commit 29ffcb28a0069fc0faa06dc20d2153dcae6a64b9
Author: Jochen Voss <voss@seehuhn.de>
Date:   Thu Sep 14 22:28:26 2006 +0100

    pde/src: prepare to generate table 1

commit 809e75b5c679f7658f0f4a3a0efb6f70e7bb967a
Author: Jochen Voss <voss@seehuhn.de>
Date:   Thu Sep 14 01:58:27 2006 +0100

    minor fixes for fast-dm release 8

commit a4762aa27d5860fea864319d8f2c6723a186e59c
Author: Jochen Voss <voss@seehuhn.de>
Date:   Thu Sep 14 01:24:57 2006 +0100

    pde/src/construct-samples.c: new file

commit c2ec770c70fecc5fde3b1e3e67633ab4794daba8
Author: Jochen Voss <voss@seehuhn.de>
Date:   Wed Sep 13 02:07:38 2006 +0100

    prepare for fast-dm release 7

commit ea7b1c963a8add5216f793e125ac6a8b4ee6c963
Author: Jochen Voss <voss@seehuhn.de>
Date:   Wed Sep 13 01:20:09 2006 +0100

    pde/src/cdf.c: make the remaining parameters tunable

    Continue the attempt to find good values.

commit e2175baff3c551b51e4187d99645ca70e777b65d
Author: Jochen Voss <voss@seehuhn.de>
Date:   Tue Sep 12 22:21:54 2006 +0100

    minor fixes

commit ca939b4a38a2a95089cca1413987f10f1447c3af
Author: Jochen Voss <voss@seehuhn.de>
Date:   Tue Sep 12 20:40:14 2006 +0100

    pde/src/tune-params.c: use the PAPI performace library

commit 0061fca58e6f8b8031c2574061339d0309f3782e
Author: Jochen Voss <voss@seehuhn.de>
Date:   Tue Sep 12 15:32:03 2006 +0100

    pde/src/tune-params.c: new file

    Start looking for good parameters systematically.

commit 8ed468e5a36f924e31895b8797eacd56df6f7cb4
Author: Jochen Voss <voss@seehuhn.de>
Date:   Tue Sep 12 15:30:34 2006 +0100

    pde/src/plot-cdf.c: bug fix (add forgotten F_delete call)

commit 5b304be6415a696efd247baf9bff84861121842c
Author: Jochen Voss <voss@seehuhn.de>
Date:   Tue Sep 12 15:29:52 2006 +0100

    pde/src/simplex.c: comment fix

commit c5dcca7d9eed646479aa2879b0358c53dbf45950
Author: Jochen Voss <voss@seehuhn.de>
Date:   Tue Sep 12 11:58:49 2006 +0100

    pde/src/pde.h: split out tunable parameters from pde.c and cdf.c.

    This introduces the defines TUNE_PDE_DT_MIN, TUNE_PDE_DT_MAX,
    TUNE_PDE_DT_SCALE, and TUNE_DZ.

commit c2487eb7db9b2adc9de8d39c68251dab887b1bd2
Author: Jochen Voss <voss@seehuhn.de>
Date:   Tue Sep 12 11:56:32 2006 +0100

    pde/src/TODO: new file

commit cd6d8b7973ddcc8fb78c221057dbcd77f0614125
Author: Jochen Voss <voss@seehuhn.de>
Date:   Mon Sep 11 22:38:48 2006 +0100

    pde/src/main.c: remove misplaced \n in output

commit f44ab8620a73fe88b95c60c6b8427143d1456571
Author: Jochen Voss <voss@seehuhn.de>
Date:   Mon Sep 11 21:26:14 2006 +0100

    consistently use the order "a z v terr sz sv st" for the parameters

commit 8cd8c5bbecc35f50e5ffccec327f498a77d3842f
Author: Jochen Voss <voss@seehuhn.de>
Date:   Mon Sep 11 19:32:51 2006 +0100

    Prepare for fast-dm release 6.

    pde/src/configure.ac: update version string
    pde/src/ChangeLog: new entries

commit ce4186d910041301e3cb6aa82b45447b7bd33a2b
Author: Jochen Voss <voss@seehuhn.de>
Date:   Mon Sep 11 18:11:20 2006 +0100

    clean up the source, minor fixes

commit b7b6f7c9e3a62be393d2a30e31dea94e9bc8edf4
Author: Andreas Vo <Andreas.Voss@psychologie.uni-freiburg.de>
Date:   Mon Sep 11 17:17:15 2006 +0200

    pde/src/EZ-diff.c: new file, EZ-model to initalise the simplex method

commit 65fe11183275611e0b4cac88ff1be6166099fcf6
Author: Jochen Voss <voss@seehuhn.de>
Date:   Mon Sep 11 15:13:32 2006 +0100

    pde/src/plot-cdf.c: MS Windows compatibility fixes

commit 687db8523af3612ca29a7ec3e9ff22eede51ee7c
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sun Sep 10 14:19:53 2006 +0100

    Prepare for fast-dm release 4.

    pde/src/ChangeLog: add the changelog entries from the git revision
      control system.
    pde/src/configure.ac: increase the version string to 4.

commit fc9787e16a71269da0c19d338a5762bc07d82611
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sun Sep 10 13:46:28 2006 +0100

    pde/src/plot-cdf.c: use getopt to set parameters

commit 73ec73a9aba7e1e097ff4f7914756040a4be95cf
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sun Sep 10 13:45:46 2006 +0100

    pde/src/cdf.c: don't fail on rounding errors

commit 03d7e5c112db684a9d4496fc3b3752593aa9bf4c
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sat Sep 9 13:42:29 2006 +0100

    pde/src/fast-dm: doc fixes

commit 6d0d24769a56300481f4909567f15f89010d759c
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sat Sep 9 13:15:41 2006 +0100

    pde/src/fast-dm: clean up the source a bit

commit 8533f94dfec359489abc96bef0d6f77eecffb3a8
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sat Sep 9 12:54:12 2006 +0100

    Rename old "pde/src/ks-pde.c" to new "pde/src/cdf.c".

commit 41e4a1945eac3db78440d4e499e74af9e9235515
Author: Jochen Voss <voss@seehuhn.de>
Date:   Fri Sep 8 22:21:07 2006 +0100

    pde/src/fast-dm: move 'get_KS' into "main.c"

commit b51e232539f37b3aaf68847c8480aa509fffa621
Author: Jochen Voss <voss@seehuhn.de>
Date:   Fri Sep 8 21:54:03 2006 +0100

    remove the old compare-methods target

commit fc2331e54c8117c14b2398165b4e4874b55efe6c
Author: Jochen Voss <voss@seehuhn.de>
Date:   Fri Sep 8 21:33:04 2006 +0100

    pde/src/plot-cdf: new target

commit 728fb4c27c96ebe1e2fe5163d2cc53cff620d06f
Author: Jochen Voss <voss@seehuhn.de>
Date:   Thu Sep 7 13:57:41 2006 +0100

    pde/src/ks-pde.c: always use 'terr' instead of 't_err'.

commit 1a852064152f024d6915af4dbf47d9f8660d82d0
Author: Jochen Voss <voss@seehuhn.de>
Date:   Thu Sep 7 13:56:28 2006 +0100

    pde/src/: cosmetic fixes

commit 4e7a69c76ebf2e1b65ee9fc86ad6b6f7c426fc0c
Author: Jochen Voss <voss@seehuhn.de>
Date:   Thu Sep 7 13:06:02 2006 +0100

    pde/src/ks-pde.c: minor fixes

commit 9b38e10418e46842531bc5ddf50cdd40d555401a
Author: Jochen Voss <voss@seehuhn.de>
Date:   Thu Sep 7 12:19:05 2006 +0100

    bruder/pde/: rename the project to fast-dm

commit 205be5925c6c5a44323ed346bceb136393f06a95
Author: Jochen Voss <voss@seehuhn.de>
Date:   Wed Sep 6 12:21:13 2006 +0100

    pde/src/configure.ac: increase the version string to 3

commit 6a502736163244c1c375892ac158087c0df57c56
Author: Jochen Voss <voss@seehuhn.de>
Date:   Wed Sep 6 12:16:53 2006 +0100

    windows compatibility fixes

commit 46dede97319d3650f4d685882fc4d880971dcaa5
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sun Sep 3 22:28:36 2006 +0100

    pde/src/compare-methods.c: cosmetic white space fix

commit 03fe11b10d8f24acc685bb6ce93d739ffb1db902
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sun Sep 3 21:44:36 2006 +0100

    [pde/src/] cosmetric fixes

    Increase the version string to "2".

    Make the methods to compute the positive and negative part of the CDF
    mor similar to each other.

    Split out the functions 'Phi' and 'Phi_inverse' into a new source file
    "phi.c".

commit 2d6f488ba3fce578660461e633dda0759f2b60c0
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sun Sep 3 19:36:03 2006 +0100

    pde/src/: switch the project to autoconf/automake

commit 35cfaa822712ab8caa5d0911ced7d978c5feb4e7
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sat Aug 26 23:16:42 2006 +0100

    pde/src/ks-pde.c: help the compiler optimisation a bit

    (was svn revision 7202)

commit 8503ecf765da4c6ecb75e62fe91b66203908404a
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sat Aug 26 22:47:30 2006 +0100

    pde/src: clean up and rearrange the source files, no functional changes

    (was svn revision 7201)

commit 6b31aec0d5e4af8f485f1d0e773fb1a1cbed2a65
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sat Aug 26 21:45:15 2006 +0100

    pde/src/compare-methods.c: new program

    (was svn revision 7200)

commit 35def816029761f4e05119c663ba0c1229aafed1
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sat Aug 26 21:44:22 2006 +0100

    pde/src/erf.c: cosmetic fixes

    (was svn revision 7199)

commit 48e03db969f2f07c14b82ec91196d197b1c4dae2
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sat Aug 26 21:43:21 2006 +0100

    put all sources under the GPL

    (was svn revision 7198)

commit 1fef32834d089ce4445e801b0796e0a6a84bf061
Author: Jochen Voss <voss@seehuhn.de>
Date:   Thu Jul 27 18:20:34 2006 +0100

    pde/src/: minor Windows compatibility fixes

    (was svn revision 7152)

commit 8e714816c3bb4d67505d5937ab535afeec9a4baf
Author: Jochen Voss <voss@seehuhn.de>
Date:   Thu Jul 27 17:52:09 2006 +0100

    pde/src/main.c: improve robustness against rounding errors

    (was svn revision 7151)

commit 3bd84e647e5539568b81369311f4b77a2b978be8
Author: Jochen Voss <voss@seehuhn.de>
Date:   Tue Jul 25 00:41:20 2006 +0100

    pde/src/main.c: white space fixes

    (was svn revision 7144)

commit 848fca9369a4569e29d2a5c62a4eda6852bb0e3c
Author: Jochen Voss <voss@seehuhn.de>
Date:   Tue Jul 25 00:28:59 2006 +0100

    pde/src/main.c: cosmetic changes

    (was svn revision 7143)

commit 52c5145c133768d2d2f64b30f603be3479d19770
Author: Jochen Voss <voss@seehuhn.de>
Date:   Tue Jul 25 00:14:53 2006 +0100

    pde/src/main.c, pde/src/integrate.tex: clean up the integration routines

    (was svn revision 7142)

commit 5337fdaa4995bcb5b4bf28c5b609486f96d0e261
Author: Jochen Voss <voss@seehuhn.de>
Date:   Mon Jul 24 21:00:17 2006 +0100

    pde/src/main.c: check for sv<0

    (was svn revision 7141)

commit c9583e35055226809f934e477471529bece75b0b
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sun Jul 9 22:01:04 2006 +0100

    pde/src/main.c: bug fixes

    (was svn revision 7138)

commit 9a4e4e5ac7b58046309dc6fbb92537097b2d767b
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sun Jul 9 21:32:43 2006 +0100

    pde/src/main.c: fix a memory leak (thanks, valgrind)

    (was svn revision 7137)

commit 57e64d536e7f1b072c80d166c98d024ee7852746
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sun Jul 9 21:26:32 2006 +0100

    pde/src/main.c: implement handling of p_sv (still buggy)

    (was svn revision 7136)

commit b8ae770a3455e49788136f635667cd1ec399bd83
Author: Jochen Voss <voss@seehuhn.de>
Date:   Thu Jul 6 23:24:55 2006 +0100

    pde/src/main.c: bug fix in the integration routine

    (was svn revision 7134)

commit 974f5c7dedfc0f482a38df44b2505c40003ed23a
Author: Jochen Voss <voss@seehuhn.de>
Date:   Thu Jul 6 22:49:54 2006 +0100

    pde/src/main.c: implement a new, faster integration routine.

    (was svn revision 7133)

commit 296f78869935feccbc3fd1378c79917e4dfdd558
Author: Jochen Voss <voss@seehuhn.de>
Date:   Thu Jul 6 15:29:10 2006 +0100

    pde/src: bug fixes

    (was svn revision 7132)

commit 077898ee834e73ce167cfc04774717a29803e14d
Author: Jochen Voss <voss@seehuhn.de>
Date:   Wed Jul 5 23:47:11 2006 +0100

    pde/src: implement variability in t_err (not yet tested)

    (was svn revision 7131)

commit a66d3c121e145d2de9a9d15340c34e02be21ba52
Author: Jochen Voss <voss@seehuhn.de>
Date:   Wed Jul 5 22:05:26 2006 +0100

    pde/src: cosmetic fixes and rearrangements.

    (was svn revision 7130)

commit ccd44ddf0d09a84de8b75462194fe7c4a8c06865
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sun Jul 2 20:27:04 2006 +0100

    pde/src: updates by Andreas

    (was svn revision 7125)

commit f0962d4d43ef3aa20ef8b10165ceec43de8553b0
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sun Jul 2 19:35:14 2006 +0100

    pde/src: Add emacs local variables to customise indentation.

    (was svn revision 7123)

commit 1480ab4feb809e3dbae1cbbf89e06879169ca5d4
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sun Jul 2 19:34:28 2006 +0100

    pde/src/main.c: Bug fixes for variability in z.

    (was svn revision 7122)

commit f610757911ee1cbdb9da9e8499adefc284a4ab9f
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sun Jul 2 16:25:59 2006 +0100

    bruder/pde/src: improve the case with variability in z

    (was svn revision 7121)

commit 4e62c5c7c4afc7654eb4d41e5b79d8f130a02af5
Author: Jochen Voss <voss@seehuhn.de>
Date:   Sat Jul 1 11:41:28 2006 +0100

    bruder/pde/src: continue work on the variablity estimation

    (was svn revision 7119)

commit 74fbfb0f86741f2d613383e73f80eb6c9e93df01
Author: Jochen Voss <voss@seehuhn.de>
Date:   Wed Jun 28 23:02:38 2006 +0100

    main.c: implement variability in z

    (was svn revision 7118)

commit 366581aad11f4a862d5d04b1c56356657a0a0709
Author: Jochen Voss <voss@seehuhn.de>
Date:   Wed Jun 28 19:44:05 2006 +0100

    clean up the files a bit

    (was svn revision 7116)

commit 1eec059971e242c5292ec5d840759121e0242d84
Author: Jochen Voss <voss@seehuhn.de>
Date:   Tue Jun 27 22:01:28 2006 +0100

    findsteps.c: minor fixes

    (was svn revision 7113)

commit 364d79a320fc552c51e1f503e9cb1cc01c97f3b7
Author: Jochen Voss <voss@seehuhn.de>
Date:   Tue Jun 27 21:50:45 2006 +0100

    pde.c: cosmetic fixes

    (was svn revision 7112)

commit a6952b9647521595c78c716153c1b9e998c3d5e8
Author: Jochen Voss <voss@seehuhn.de>
Date:   Tue Jun 27 21:39:12 2006 +0100

    pde.c: solve_tridiag: bug fix, tested this time

    (was svn revision 7111)

commit f77ee92c81780b2d506bcfc909ae5b7c6645e67d
Author: Jochen Voss <voss@seehuhn.de>
Date:   Tue Jun 27 20:58:28 2006 +0100

    pde.c: bug fix (solving the tridiag SLE)

    (was svn revision 7110)

commit d81403d6de0f207c4239b426324a880be71f6063
Author: Jochen Voss <voss@seehuhn.de>
Date:   Tue Jun 27 19:24:01 2006 +0100

    bug fixes

    (was svn revision 7109)

commit 6377134e423dda820b18c53d250048d0e56e70f1
Author: Jochen Voss <voss@seehuhn.de>
Date:   Tue Jun 27 19:14:27 2006 +0100

    Rename bruder/src/pde/ to bruder/pde/src/ .

    (was svn revision 7108)
