Home
Trees
Indices
Help
PyDSTool
[
hide private
]
[
frames
] |
no frames
]
Identifier Index
[
A
B
C
D
E
F
G
H
I
J
K
L
M
N
O
P
Q
R
S
T
U
V
W
X Y
Z
_
]
R
r_
(in
PyDSTool.PyCont.ContClass'
)
Randrange
(in
PyDSTool.Toolbox.NineML
)
res_fn_lookup
(in
PyDSTool.Toolbox.ParamEst
)
r_
(in
PyDSTool.PyCont.Continuation
)
Randrange
(in
PyDSTool.Toolbox.adjointPRC
)
rescatter()
(in
PyDSTool.Toolbox.fracdim
)
r_
(in
PyDSTool.PyCont.misc
)
Randrange
(in
PyDSTool.Toolbox.fracdim
)
reserved_keywords
(in
PyDSTool.parseUtils
)
r_
(in
PyDSTool.Toolbox.ActivationFuncs
)
Randrange
(in
PyDSTool.Toolbox.makeSloppyModel
)
reset()
(in
Event
)
r_
(in
PyDSTool.Toolbox.DSSRT_tools
)
Randrange
(in
PyDSTool.Toolbox.neuralcomp
)
reset()
(in
Continuation
)
r_
(in
PyDSTool.Toolbox.InputProfile
)
Randrange
(in
PyDSTool.Toolbox.phaseplane
)
reset()
(in
EquilibriumCurve
)
r_
(in
PyDSTool.Toolbox.ModelHelper
)
Randrange
(in
PyDSTool.Toolbox.synthetic_data
)
reset()
(in
LimitCycleCurve
)
r_
(in
PyDSTool.Toolbox.NineML
)
Randrange
(in
PyDSTool.Toolbox.syntheticdata
)
reset()
(in
FSM
)
r_
(in
PyDSTool.Toolbox.adjointPRC
)
rcParams
(in
PyDSTool.PyCont.ContClass'
)
reset()
(in
dssrt_assistant
)
r_
(in
PyDSTool.Toolbox.data_analysis
)
rcParams
(in
PyDSTool.PyCont.Continuation
)
reset()
(in
FIFOqueue_uniquenode
)
r_
(in
PyDSTool.Toolbox.makeSloppyModel
)
rcParams
(in
PyDSTool.PyCont.Plotting
)
reset()
(in
base_n_counter
)
r_
(in
PyDSTool.Toolbox.neuralcomp
)
rcParams
(in
PyDSTool.PyCont.misc
)
Reset()
(in
integrator
)
r_
(in
PyDSTool.Toolbox.phaseplane
)
rcParams
(in
PyDSTool.Toolbox.data_analysis
)
reset()
(in
IntegratorBase
)
r_
(in
PyDSTool.Toolbox.synthetic_data
)
rcParamsDefault
(in
PyDSTool.PyCont.ContClass'
)
reset()
(in
vode
)
r_
(in
PyDSTool.Toolbox.syntheticdata
)
rcParamsDefault
(in
PyDSTool.PyCont.Continuation
)
reset_log()
(in
ParamEst
)
r_
(in
PyDSTool
)
rcParamsDefault
(in
PyDSTool.PyCont.Plotting
)
reset_metric()
(in
feature
)
rad2deg
(in
PyDSTool.Toolbox.ActivationFuncs
)
rcParamsDefault
(in
PyDSTool.PyCont.misc
)
reset_weights()
(in
context
)
rad2deg
(in
PyDSTool.Toolbox.DSSRT_tools
)
rcParamsDefault
(in
PyDSTool.Toolbox.data_analysis
)
resetEvents()
(in
Generator
)
rad2deg
(in
PyDSTool.Toolbox.InputProfile
)
re_number
(in
PyDSTool.Interval'
)
resetEventTimes()
(in
Generator
)
rad2deg
(in
PyDSTool.Toolbox.ModelHelper
)
readArgs()
(in
PyDSTool.parseUtils
)
resetEventTimes()
(in
Model
)
rad2deg
(in
PyDSTool.Toolbox.NineML
)
reciprocal
(in
PyDSTool.Toolbox.ActivationFuncs
)
resetEvtimes()
(in
EventStruct
)
rad2deg
(in
PyDSTool.Toolbox.adjointPRC
)
reciprocal
(in
PyDSTool.Toolbox.DSSRT_tools
)
resetHighLevelEvents()
(in
EventStruct
)
rad2deg
(in
PyDSTool.Toolbox.fracdim
)
reciprocal
(in
PyDSTool.Toolbox.InputProfile
)
resetParArgs()
(in
ParamEst
)
rad2deg
(in
PyDSTool.Toolbox.makeSloppyModel
)
reciprocal
(in
PyDSTool.Toolbox.ModelHelper
)
residual()
(in
context
)
rad2deg
(in
PyDSTool.Toolbox.neuralcomp
)
reciprocal
(in
PyDSTool.Toolbox.NineML
)
residual()
(in
FiniteDifferencesCache
)
rad2deg
(in
PyDSTool.Toolbox.phaseplane
)
reciprocal
(in
PyDSTool.Toolbox.adjointPRC
)
residual()
(in
FiniteDifferencesFunction
)
rad2deg
(in
PyDSTool.Toolbox.synthetic_data
)
reciprocal
(in
PyDSTool.Toolbox.fracdim
)
residual_fn_context
(in
PyDSTool.Toolbox.ParamEst
)
rad2deg
(in
PyDSTool.Toolbox.syntheticdata
)
reciprocal
(in
PyDSTool.Toolbox.makeSloppyModel
)
residual_fn_context_1D
(in
PyDSTool.Toolbox.ParamEst
)
rad2deg
(in
PyDSTool
)
reciprocal
(in
PyDSTool.Toolbox.neuralcomp
)
resolve_bin_index()
(in
data_bins
)
radau
(in
PyDSTool.Generator.Radau_ODEsystem'
)
reciprocal
(in
PyDSTool.Toolbox.phaseplane
)
resolveClashingAuxFnPars()
(in
PyDSTool.FuncSpec'
)
Radau_ODEsystem
(in
PyDSTool.Generator.Radau_ODEsystem'
)
reciprocal
(in
PyDSTool.Toolbox.synthetic_data
)
resolveMacroTargets()
(in
PyDSTool.ModelSpec'
)
Radau_ODEsystem'
(in
PyDSTool.Generator
)
reciprocal
(in
PyDSTool.Toolbox.syntheticdata
)
resolveSpecTypeCombos()
(in
PyDSTool.Symbolic
)
Radians
(in
PyDSTool.ModelSpec'
)
reciprocal
(in
PyDSTool
)
restart()
(in
PyDSTool
)
Radians
(in
PyDSTool
)
recordHistory()
(in
Optimizer
)
restart_conjugate_gradient
(in
PyDSTool.Toolbox.optimizers.step
)
Radians
(in
PyDSTool.Symbolic
)
recreate()
(in
FuncSpec
)
RestartNotOrthogonalConjugateGradientStep
(in
PyDSTool.Toolbox.optimizers.step.restart_conjugate_gradient
)
Radians
(in
PyDSTool.Toolbox.ActivationFuncs
)
rectify()
(in
PyDSTool.Toolbox.data_analysis
)
RestartPeriodicallyConjugateGradientStep
(in
PyDSTool.Toolbox.optimizers.step.restart_conjugate_gradient
)
Radians
(in
PyDSTool.Toolbox.DSSRT_tools
)
recurrence_times()
(in
PyDSTool.Toolbox.data_analysis
)
restrict_opt()
(in
PyDSTool.Toolbox.ParamEst
)
Radians
(in
PyDSTool.Toolbox.InputProfile
)
redefine()
(in
QuantSpec
)
reverse()
(in
Pointset
)
Radians
(in
PyDSTool.Toolbox.ModelHelper
)
redefine()
(in
Quantity
)
Rhs()
(in
Dopri_ODEsystem
)
Radians
(in
PyDSTool.Toolbox.NineML
)
redefineQuantity()
(in
GenTransform
)
Rhs()
(in
Euler_ODEsystem
)
radians
(in
PyDSTool.Toolbox.NineML
)
Redirector
(in
PyDSTool
)
Rhs()
(in
MapSystem
)
Radians
(in
PyDSTool.Toolbox.adjointPRC
)
Redirector
(in
PyDSTool.Redirector
)
Rhs()
(in
ODEsystem
)
Radians
(in
PyDSTool.Toolbox.fracdim
)
REDUCE
(in
PyDSTool.fixedpickle
)
Rhs()
(in
Radau_ODEsystem
)
Radians
(in
PyDSTool.Toolbox.makeSloppyModel
)
reduced_Vode_system()
(in
dssrt_assistant
)
Rhs()
(in
Vode_ODEsystem
)
Radians
(in
PyDSTool.Toolbox.neuralcomp
)
refresh()
(in
pargs
)
Rhs()
(in
GeneratorInterface
)
Radians
(in
PyDSTool.Toolbox.phaseplane
)
regime
(in
PyDSTool.Toolbox.dssrt
)
Rhs()
(in
ModelInterface
)
radians
(in
PyDSTool.Toolbox.phaseplane
)
register()
(in
genDBClass
)
Rhs()
(in
HybridModel
)
Radians
(in
PyDSTool.Toolbox.synthetic_data
)
regObject
(in
PyDSTool.ModelSpec'
)
Rhs()
(in
NonHybridModel
)
radians
(in
PyDSTool.Toolbox.synthetic_data
)
RelativeParametersCriterion
(in
PyDSTool.Toolbox.optimizers.criterion.criteria
)
Rhs()
(in
integrator
)
Radians
(in
PyDSTool.Toolbox.syntheticdata
)
RelativeValueCriterion
(in
PyDSTool.Toolbox.optimizers.criterion.criteria
)
RHSfuncSpec
(in
PyDSTool.FuncSpec'
)
radians
(in
PyDSTool.Toolbox.syntheticdata
)
release
(in
PyDSTool.conf
)
right_shift
(in
PyDSTool.Toolbox.ActivationFuncs
)
RAISE
(in
PyDSTool
)
remain()
(in
PyDSTool.common
)
right_shift
(in
PyDSTool.Toolbox.DSSRT_tools
)
RAISE
(in
PyDSTool.Toolbox.ActivationFuncs
)
remain()
(in
PyDSTool.utils
)
right_shift
(in
PyDSTool.Toolbox.InputProfile
)
RAISE
(in
PyDSTool.Toolbox.DSSRT_tools
)
remainder
(in
PyDSTool.Toolbox.ActivationFuncs
)
right_shift
(in
PyDSTool.Toolbox.ModelHelper
)
RAISE
(in
PyDSTool.Toolbox.InputProfile
)
remainder
(in
PyDSTool.Toolbox.DSSRT_tools
)
right_shift
(in
PyDSTool.Toolbox.NineML
)
RAISE
(in
PyDSTool.Toolbox.ModelHelper
)
remainder
(in
PyDSTool.Toolbox.InputProfile
)
right_shift
(in
PyDSTool.Toolbox.adjointPRC
)
RAISE
(in
PyDSTool.Toolbox.NineML
)
remainder
(in
PyDSTool.Toolbox.ModelHelper
)
right_shift
(in
PyDSTool.Toolbox.fracdim
)
RAISE
(in
PyDSTool.Toolbox.adjointPRC
)
remainder
(in
PyDSTool.Toolbox.NineML
)
right_shift
(in
PyDSTool.Toolbox.makeSloppyModel
)
RAISE
(in
PyDSTool.Toolbox.fracdim
)
remainder
(in
PyDSTool.Toolbox.adjointPRC
)
right_shift
(in
PyDSTool.Toolbox.neuralcomp
)
RAISE
(in
PyDSTool.Toolbox.makeSloppyModel
)
remainder
(in
PyDSTool.Toolbox.fracdim
)
right_shift
(in
PyDSTool.Toolbox.phaseplane
)
RAISE
(in
PyDSTool.Toolbox.neuralcomp
)
remainder
(in
PyDSTool.Toolbox.makeSloppyModel
)
right_shift
(in
PyDSTool.Toolbox.synthetic_data
)
RAISE
(in
PyDSTool.Toolbox.phaseplane
)
remainder
(in
PyDSTool.Toolbox.neuralcomp
)
right_shift
(in
PyDSTool.Toolbox.syntheticdata
)
RAISE
(in
PyDSTool.Toolbox.synthetic_data
)
remainder
(in
PyDSTool.Toolbox.phaseplane
)
right_shift
(in
PyDSTool
)
RAISE
(in
PyDSTool.Toolbox.syntheticdata
)
remainder
(in
PyDSTool.Toolbox.synthetic_data
)
rint
(in
PyDSTool.Toolbox.ActivationFuncs
)
Randint
(in
PyDSTool.ModelSpec'
)
remainder
(in
PyDSTool.Toolbox.syntheticdata
)
rint
(in
PyDSTool.Toolbox.DSSRT_tools
)
Randint
(in
PyDSTool
)
remainder
(in
PyDSTool
)
rint
(in
PyDSTool.Toolbox.InputProfile
)
Randint
(in
PyDSTool.Symbolic
)
remove()
(in
GenTransform
)
rint
(in
PyDSTool.Toolbox.ModelHelper
)
Randint
(in
PyDSTool.Toolbox.ActivationFuncs
)
remove()
(in
ModelManager
)
rint
(in
PyDSTool.Toolbox.NineML
)
Randint
(in
PyDSTool.Toolbox.DSSRT_tools
)
remove()
(in
ModelTransform
)
rint
(in
PyDSTool.Toolbox.adjointPRC
)
Randint
(in
PyDSTool.Toolbox.InputProfile
)
remove()
(in
ModelSpec
)
rint
(in
PyDSTool.Toolbox.fracdim
)
Randint
(in
PyDSTool.Toolbox.ModelHelper
)
remove()
(in
PointInfo
)
rint
(in
PyDSTool.Toolbox.makeSloppyModel
)
Randint
(in
PyDSTool.Toolbox.NineML
)
remove()
(in
Pointset
)
rint
(in
PyDSTool.Toolbox.neuralcomp
)
Randint
(in
PyDSTool.Toolbox.adjointPRC
)
remove()
(in
phaseplane
)
rint
(in
PyDSTool.Toolbox.phaseplane
)
Randint
(in
PyDSTool.Toolbox.fracdim
)
remove_indices_from_range()
(in
PyDSTool.parseUtils
)
rint
(in
PyDSTool.Toolbox.synthetic_data
)
Randint
(in
PyDSTool.Toolbox.makeSloppyModel
)
removeAuxFn()
(in
auxfnDBclass
)
rint
(in
PyDSTool.Toolbox.syntheticdata
)
Randint
(in
PyDSTool.Toolbox.neuralcomp
)
removelabel()
(in
Point
)
rint
(in
PyDSTool
)
Randint
(in
PyDSTool.Toolbox.phaseplane
)
removelabel()
(in
Pointset
)
rollback_gentrans()
(in
ModelTransform
)
Randint
(in
PyDSTool.Toolbox.synthetic_data
)
rename()
(in
ModelSpec
)
rollback_trans()
(in
ModelManager
)
Randint
(in
PyDSTool.Toolbox.syntheticdata
)
rename()
(in
Pointset
)
Rosenbrock
(in
PyDSTool.Toolbox.optimizers.tests.test_rosenbrock
)
Random
(in
PyDSTool.ModelSpec'
)
rename()
(in
Quantity
)
rotate_phase()
(in
PyDSTool.Toolbox.adjointPRC
)
Random
(in
PyDSTool
)
renameTraj()
(in
Model
)
rout
(in
PyDSTool.Generator.Dopri_ODEsystem'
)
Random
(in
PyDSTool.Symbolic
)
renderForCode()
(in
QuantSpec
)
rout
(in
PyDSTool.Generator.Radau_ODEsystem'
)
Random
(in
PyDSTool.Toolbox.ActivationFuncs
)
renderForCode()
(in
Quantity
)
rout
(in
PyDSTool.PyCont.ContClass'
)
Random
(in
PyDSTool.Toolbox.DSSRT_tools
)
reorder()
(in
symbolMapClass
)
rout
(in
PyDSTool.Toolbox.NineML
)
Random
(in
PyDSTool.Toolbox.InputProfile
)
replaceCallsWithDummies()
(in
PyDSTool.parseUtils
)
rout
(in
PyDSTool.Toolbox.ParamEst
)
Random
(in
PyDSTool.Toolbox.ModelHelper
)
replaceSep()
(in
PyDSTool.parseUtils
)
rout
(in
PyDSTool.Toolbox.phaseplane
)
Random
(in
PyDSTool.Toolbox.NineML
)
replaceSepInv()
(in
PyDSTool.parseUtils
)
rout
(in
PyDSTool.Toolbox.synthetic_data
)
Random
(in
PyDSTool.Toolbox.adjointPRC
)
replaceSepList()
(in
PyDSTool.parseUtils
)
rout
(in
PyDSTool.Toolbox.syntheticdata
)
Random
(in
PyDSTool.Toolbox.fracdim
)
replaceSepListInv()
(in
PyDSTool.parseUtils
)
rout
(in
PyDSTool.utils
)
Random
(in
PyDSTool.Toolbox.makeSloppyModel
)
replaceSepQSpec()
(in
PyDSTool.parseUtils
)
Run()
(in
dopri
)
Random
(in
PyDSTool.Toolbox.neuralcomp
)
replaceSepStr()
(in
PyDSTool.parseUtils
)
Run()
(in
radau
)
Random
(in
PyDSTool.Toolbox.phaseplane
)
report()
(in
Verbose
)
run()
(in
BoundMin
)
Random
(in
PyDSTool.Toolbox.synthetic_data
)
report_error()
(in
Verbose
)
run()
(in
LMpest
)
Random
(in
PyDSTool.Toolbox.syntheticdata
)
rerr
(in
PyDSTool.Generator.Dopri_ODEsystem'
)
run()
(in
ParamEst
)
randomlookup
(in
PyDSTool.Symbolic
)
rerr
(in
PyDSTool.Generator.Radau_ODEsystem'
)
run()
(in
simulator
)
Randrange
(in
PyDSTool.ModelSpec'
)
rerr
(in
PyDSTool.PyCont.ContClass'
)
Run()
(in
integrator
)
Randrange
(in
PyDSTool
)
rerr
(in
PyDSTool.Toolbox.NineML
)
run()
(in
IntegratorBase
)
Randrange
(in
PyDSTool.Symbolic
)
rerr
(in
PyDSTool.Toolbox.ParamEst
)
run()
(in
vode
)
Randrange
(in
PyDSTool.Toolbox.ActivationFuncs
)
rerr
(in
PyDSTool.Toolbox.phaseplane
)
run_relax()
(in
IntegratorBase
)
Randrange
(in
PyDSTool.Toolbox.DSSRT_tools
)
rerr
(in
PyDSTool.Toolbox.synthetic_data
)
run_relax()
(in
vode
)
Randrange
(in
PyDSTool.Toolbox.InputProfile
)
rerr
(in
PyDSTool.Toolbox.syntheticdata
)
runner
(in
IntegratorBase
)
Randrange
(in
PyDSTool.Toolbox.ModelHelper
)
rerr
(in
PyDSTool.utils
)
runner
(in
vode
)
Home
Trees
Indices
Help
PyDSTool
Generated by Epydoc 3.0.1 on Sun Dec 2 23:44:12 2012
http://epydoc.sourceforge.net