Metadata-Version: 1.0
Name: caspo
Version: 2.1.0
Summary: Reasoning on the response of logical signaling networks with Answer Set Programming
Home-page: http://bioasp.github.io/caspo/
Author: Santiago Videla
Author-email: santiago.videla@gmail.com
License: GPLv3+
Description: 
        The aim of caspo is to implement a pipeline for automated reasoning on logical signaling networks. 
        Main features include, learning of logical networks from experiments, design new experiments in 
        order to reduce the uncertainty, and finding intervention strategies to control the biological system.
        For more details visit `caspo's website`_.
        
        .. _`caspo's website`: http://bioasp.github.io/caspo/
        
        2.1.0 (2014-08-28)
        ------------------
        - Bugfix in ASP encoding for caspo control
        - Implements caspo design from a list of experiments
        - Optionally relax hard constraint in caspo design
        - Implements random learner in caspo learn
        
        2.0.1 (2014-04-18)
        ------------------
        - Improve ASP encoding for caspo design
        - Use to_str method available in pyzcasp 1.0.1
        
        2.0.0 (2014-03-24)
        ------------------
        - Complete refactoring (no backwards compatibility)
        - Introduce subcommands: 
            - learn: learning logical networks
            - control: finding intervention strategies
            - analyze: compute I/O behaviors and basic stats
            - design: experimental design to discriminate I/O behaviors
            - visualize: dump results from other subcommands to dot files
        - Uses latest potassco tools: clingo >= 4.3.0, gringo >= 4.3.0 and clasp >= 3.0.2
        
Keywords: logical signaling networks systems biology answer set programming
Platform: UNKNOWN
Classifier: Intended Audience :: Science/Research
Classifier: Intended Audience :: Healthcare Industry
Classifier: License :: OSI Approved :: GNU General Public License v3 or later (GPLv3+)
Classifier: Operating System :: OS Independent
Classifier: Programming Language :: Python :: 2.7
Classifier: Topic :: Scientific/Engineering :: Artificial Intelligence
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
