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setup.cfg
setup.py
docs/Makefile
docs/source/conf.py
docs/source/examples.rst
docs/source/gps.rst
docs/source/index.rst
docs/source/infpy.dbn.rst
docs/source/infpy.decision.rst
docs/source/infpy.decision.test.rst
docs/source/infpy.dp.hdpm.rst
docs/source/infpy.dp.hdpm.uncertainty.rst
docs/source/infpy.dp.rst
docs/source/infpy.exp.rst
docs/source/infpy.exp.test.rst
docs/source/infpy.genepy.rst
docs/source/infpy.gp.rst
docs/source/infpy.gp.test.rst
docs/source/infpy.mixture.rst
docs/source/infpy.mixture.test.rst
docs/source/infpy.rst
docs/source/infpy.test.rst
docs/source/infpy.variational.message_passing.rst
docs/source/infpy.variational.rst
docs/source/infpy.variational.test.rst
docs/source/installation.rst
docs/source/modules.rst
docs/source/Code/data_gen.py
docs/source/Code/figure_covariance_examples.py
docs/source/Code/figure_learning.py
docs/source/Code/figure_noise.py
docs/source/Code/figure_samples.py
docs/source/Code/infpy_predict.py
docs/source/Images/covariance_function_matern_32.eps
docs/source/Images/covariance_function_matern_32.png
docs/source/Images/covariance_function_matern_52.eps
docs/source/Images/covariance_function_matern_52.png
docs/source/Images/covariance_function_periodic.eps
docs/source/Images/covariance_function_periodic.png
docs/source/Images/covariance_function_rq.eps
docs/source/Images/covariance_function_rq.png
docs/source/Images/covariance_function_se.eps
docs/source/Images/covariance_function_se.png
docs/source/Images/covariance_function_se_long_length.eps
docs/source/Images/covariance_function_se_long_length.png
docs/source/Images/gp-modulated-sin-data.eps
docs/source/Images/gp-modulated-sin-data.png
docs/source/Images/gp-modulated-sin-learnt.eps
docs/source/Images/gp-modulated-sin-learnt.png
docs/source/Images/gp-modulated-sin-more-noise.eps
docs/source/Images/gp-modulated-sin-more-noise.png
docs/source/Images/gp-modulated-sin-se-shorter.eps
docs/source/Images/gp-modulated-sin-se-shorter.png
docs/source/Images/gp-modulated-sin-se.eps
docs/source/Images/gp-modulated-sin-se.png
docs/source/Images/gp-uk-gas-data.eps
docs/source/Images/gp-uk-gas-data.png
docs/source/Images/gp-uk-gas-general.eps
docs/source/Images/gp-uk-gas-general.png
docs/source/Images/gp-uk-gas-periodic-reasonable-length.eps
docs/source/Images/gp-uk-gas-periodic-reasonable-length.png
docs/source/Images/gp-uk-gas-periodic.eps
docs/source/Images/gp-uk-gas-periodic.png
docs/source/Images/learning_first_guess.eps
docs/source/Images/learning_first_guess.png
docs/source/Images/learning_learnt.eps
docs/source/Images/learning_learnt.png
docs/source/Images/noise_high.eps
docs/source/Images/noise_high.png
docs/source/Images/noise_low.eps
docs/source/Images/noise_low.png
docs/source/Images/noise_mid.eps
docs/source/Images/noise_mid.png
docs/source/Images/samples_from_posterior.eps
docs/source/Images/samples_from_posterior.png
docs/source/Images/samples_from_prior.eps
docs/source/Images/samples_from_prior.png
docs/source/Images/simple-example-data.eps
docs/source/Images/simple-example-data.png
docs/source/Images/simple-example-learnt.eps
docs/source/Images/simple-example-learnt.png
docs/source/Images/simple-example-more-noise.eps
docs/source/Images/simple-example-more-noise.png
docs/source/Images/simple-example-se-shorter.eps
docs/source/Images/simple-example-se-shorter.png
docs/source/Images/simple-example-se.eps
docs/source/Images/simple-example-se.png
etc/update_dist
infpy/__init__.py
infpy/bootstrap.py
infpy/convergence_test.py
infpy/distribution.py
infpy/mvn_mixture.py
infpy/roc.py
infpy/types.py
infpy/utils.py
infpy.egg-info/PKG-INFO
infpy.egg-info/SOURCES.txt
infpy.egg-info/dependency_links.txt
infpy.egg-info/requires.txt
infpy.egg-info/top_level.txt
infpy/dbn/__init__.py
infpy/dbn/harmonium.py
infpy/dbn/rbm.py
infpy/decision/__init__.py
infpy/decision/attributes.py
infpy/decision/decision.py
infpy/decision/genepy_interface.py
infpy/decision/rule_generation.py
infpy/decision/test/__init__.py
infpy/decision/test/decision_test.py
infpy/decision/test/genepy_test.py
infpy/decision/test/rule_test.py
infpy/dp/__init__.py
infpy/dp/gen_artificial_data.py
infpy/dp/infinite_multinomials.py
infpy/dp/doc/mvn.pdf
infpy/dp/doc/mvn.tex
infpy/dp/hdpm/__init__.py
infpy/dp/hdpm/math.py
infpy/dp/hdpm/summarise.py
infpy/dp/hdpm/utils.py
infpy/dp/hdpm/Test/basics.py
infpy/dp/hdpm/Test/check_performance.py
infpy/dp/hdpm/Test/decorator_sandbox.py
infpy/dp/hdpm/Test/examine_profile_data.py
infpy/dp/hdpm/Test/simple_corpus.py
infpy/dp/hdpm/Test/test-all.sh
infpy/dp/hdpm/Test/test-caching.sh
infpy/dp/hdpm/Test/test_LL.py
infpy/dp/hdpm/Test/test_dimensions.py
infpy/dp/hdpm/Test/test_hdpm.py
infpy/dp/hdpm/Test/test_hyperparameters.py
infpy/dp/hdpm/Test/test_initialisation_methods.py
infpy/dp/hdpm/Test/test_simple_corpus.py
infpy/dp/hdpm/Test/test_without_memoisation.py
infpy/dp/hdpm/sage/hdpm.py
infpy/dp/hdpm/uncertainty/__init__.py
infpy/dp/hdpm/uncertainty/summarise.py
infpy/dp/hdpm/uncertainty/test/run_hdpm.py
infpy/dp/hdpm/uncertainty/test/test_uncertainty_hdpm.py
infpy/exp/__init__.py
infpy/exp/test/__init__.py
infpy/exp/test/exp_family_test.py
infpy/genepy/__init__.py
infpy/genepy/population.py
infpy/gp/__init__.py
infpy/gp/feature_kernel.py
infpy/gp/gaussian_process.py
infpy/gp/gp_examples.py
infpy/gp/kernel.py
infpy/gp/kernel_short_names.py
infpy/gp/matern_kernel.py
infpy/gp/neural_network_kernel.py
infpy/gp/periodic_kernel.py
infpy/gp/piecewise_poly_kernel.py
infpy/gp/pre_calculated_kernel.py
infpy/gp/rational_quadratic_kernel.py
infpy/gp/real_kernel.py
infpy/gp/se_kernel.py
infpy/gp/sum_kernel.py
infpy/gp/examples/fitting_demo.py
infpy/gp/examples/gp-modulated-sin-data.eps
infpy/gp/examples/gp-modulated-sin-learnt.eps
infpy/gp/examples/gp-modulated-sin-more-noise.eps
infpy/gp/examples/gp-modulated-sin-se-shorter.eps
infpy/gp/examples/gp-modulated-sin-se.eps
infpy/gp/examples/gp-uk-gas-data.eps
infpy/gp/examples/gp-uk-gas-general.eps
infpy/gp/examples/gp-uk-gas-periodic-reasonable-length.eps
infpy/gp/examples/gp-uk-gas-periodic.eps
infpy/gp/examples/gp_modulated_sin.py
infpy/gp/examples/gp_noisy_sin.py
infpy/gp/examples/gp_r_uk_gas_consumption.py
infpy/gp/examples/sample_demo.py
infpy/gp/examples/simple-example-data.eps
infpy/gp/examples/simple-example-learnt.eps
infpy/gp/examples/simple-example-more-noise.eps
infpy/gp/examples/simple-example-se-shorter.eps
infpy/gp/examples/simple-example-se.eps
infpy/gp/examples/simple_example.py
infpy/gp/test/__init__.py
infpy/gp/test/gp_test.py
infpy/gp/test/kernel_test.py
infpy/mixture/__init__.py
infpy/mixture/beta.py
infpy/mixture/test/__init__.py
infpy/mixture/test/beta_test.py
infpy/plot/violin.py
infpy/test/__init__.py
infpy/test/distribution_test.py
infpy/test/mvn_mixture_test.py
infpy/test/utils_test.py
infpy/variational/__init__.py
infpy/variational/dirichlet_process.py
infpy/variational/message_passing/__init__.py
infpy/variational/message_passing/factorised_variational.py
infpy/variational/message_passing/svmp.py
infpy/variational/message_passing/vmp.py
infpy/variational/test/__init__.py
infpy/variational/test/dirichlet_process_test.py
scripts/factor.mac
scripts/factor.py
scripts/gp_test.py
scripts/rpy_test.py
scripts/sandbox.py
scripts/test_bp.py
scripts/test_dirichlet.py
scripts/test_numpy_mvn.py
scripts/variational_dp.py
scripts/beta-mixtures/benchmark_import_ipython.py
scripts/beta-mixtures/benchmark_import_numpy.py
scripts/beta-mixtures/beta_mixture_compare.py
scripts/beta-mixtures/beta_mixture_fixed_points.py
scripts/beta-mixtures/beta_mixture_local_min.py
scripts/beta-mixtures/bum.R
scripts/beta-mixtures/check_beta_parameter_estimates.py
scripts/beta-mixtures/examine_beta_conjugate_prior.py
scripts/beta-mixtures/fit-kernel-density.R
scripts/beta-mixtures/fit-mog.R
scripts/beta-mixtures/fit_beta_mixture.py
scripts/beta-mixtures/lorenz-mixture.R
scripts/beta-mixtures/plot_beta_conj_prior.py
scripts/beta-mixtures/plot_beta_mixture_ll.py
scripts/beta-mixtures/which-KL.R
scripts/test_data/cshl-100.dat
scripts/test_data/cshl-300.dat
scripts/test_data/cshl-50.dat
scripts/test_data/down-sample.R
scripts/test_data/fit_mixtures.sh
scripts/test_data/lorenz-p-values.csv
scripts/test_data/parse_lorenz_values.py
scripts/test_data/weights.txt
scripts/test_data/x.txt