LIMIX

What is Limix?

Limix is a flexible and efficient linear mixed model library with interfaces to Python and other scripting languages.

Authors:

Oliver Stegle (stegle@ebi.ac.uk) Christoph Lippert (lippert@microsoft.com)
Franceso Paolo Casale (casale@ebi.ac.uk)


Installation:

Recommended is an installation via pypi.

pip install limix will work on most systems.

If you want to install LIMIX from source you require:
Python:
- socns, scipy, numpy

Swig:
- swig 2.0 or higher

How to use LIMIX?
A good starting point is our package Vignettes. These tutorials are freely available in this repository: https://github.com/PMBio/limix-tutorials.

The main package vignette can also be viewed using the ipython notebook viewer:
http://nbviewer.ipython.org/github/pmbio/limix-tutorials/blob/master/demo_yeast.ipynb
