CMakeLists.txt
MANIFEST.in
README
setup.py
Demos/Genesis_files/EGFR_MAPK_58.g
Demos/Genesis_files/EGFR_MAPK_58.png
Demos/Genesis_files/Kholodenko.g
Demos/Genesis_files/Kholodenko.png
Demos/Genesis_files/M1719.cspace
Demos/Genesis_files/M1719.g
Demos/Genesis_files/OSC_Cspace.g
Demos/Genesis_files/Osc_cspace_ref_model.png
Demos/Genesis_files/Repressillator.g
Demos/Genesis_files/acc35.g
Demos/Genesis_files/acc68.g
Demos/Genesis_files/acc68.png
Demos/Genesis_files/enz_classical_explicit.g
Demos/Genesis_files/enz_rea.g
Demos/Genesis_files/kkit_objects_example.g
Demos/Genesis_files/reaction.g
Demos/Genesis_files/traff_nn_diff_BIS.g
Demos/Genesis_files/traff_nn_diff_TRI.g
Demos/Genesis_files/traff_nn_diff_TRI.png
Demos/hopfield/guiHopfield.py
Demos/hopfield/hopfield.py
Demos/hopfield/hopfield1.py
Demos/hopfield/hopfield_ui.py
Demos/hopfield/hopfield_ui.ui
Demos/hopfield/input.csv
Demos/hopfield/memory1.csv
Demos/hopfield/memory2.csv
Demos/hopfield/test.py
Demos/izhikevich/Izhikevich.py
Demos/izhikevich/demogui_qt.py
Demos/neuroml/CA1PyramidalCell/CA1.net.xml
Demos/neuroml/CA1PyramidalCell/CA1.py
Demos/neuroml/CA1PyramidalCell/CA1_hsolve.py
Demos/neuroml/CA1PyramidalCell/CA1soma.net.xml
Demos/neuroml/CA1PyramidalCell/FvsI_CA1.py
Demos/neuroml/CA1PyramidalCell/README
Demos/neuroml/CA1PyramidalCell/cells_channels/CA1.morph.bad.xml
Demos/neuroml/CA1PyramidalCell/cells_channels/CA1.morph.original.xml
Demos/neuroml/CA1PyramidalCell/cells_channels/CA1.morph.xml
Demos/neuroml/CA1PyramidalCell/cells_channels/CA1_original.morph.xml
Demos/neuroml/CA1PyramidalCell/cells_channels/CA1soma.morph.xml
Demos/neuroml/CA1PyramidalCell/cells_channels/Gran_KDr_98.xml
Demos/neuroml/CA1PyramidalCell/cells_channels/Gran_NaF_98.xml
Demos/neuroml/CA1PyramidalCell/cells_channels/Purkinje_KA.xml
Demos/neuroml/CA1PyramidalCell/cells_channels/README
Demos/neuroml/CA1PyramidalCell/cells_channels/hd.xml
Demos/neuroml/CA1PyramidalCell/cells_channels/hd_minus73.xml
Demos/neuroml/CA1PyramidalCell/cells_channels/kad.xml
Demos/neuroml/CA1PyramidalCell/cells_channels/kap.xml
Demos/neuroml/CA1PyramidalCell/cells_channels/kdr.xml
Demos/neuroml/CA1PyramidalCell/cells_channels/na3.xml
Demos/neuroml/CA1PyramidalCell/cells_channels/nax.xml
Demos/neuroml/CA1PyramidalCell/cells_channels/pas.xml
Demos/neuroml/GranuleCell/FvsI_Granule98.py
Demos/neuroml/GranuleCell/Granule98.py
Demos/neuroml/GranuleCell/Granule98_hsolve.py
Demos/neuroml/GranuleCell/GranuleCell.net.xml
Demos/neuroml/GranuleCell/README
Demos/neuroml/GranuleCell/cells_channels/GranPassiveCond.xml
Demos/neuroml/GranuleCell/cells_channels/Gran_CaHVA_98.xml
Demos/neuroml/GranuleCell/cells_channels/Gran_CaPool_98.xml
Demos/neuroml/GranuleCell/cells_channels/Gran_H_98.xml
Demos/neuroml/GranuleCell/cells_channels/Gran_KA_98.xml
Demos/neuroml/GranuleCell/cells_channels/Gran_KCa_98.xml
Demos/neuroml/GranuleCell/cells_channels/Gran_KDr_98.xml
Demos/neuroml/GranuleCell/cells_channels/Gran_NaF_98.xml
Demos/neuroml/GranuleCell/cells_channels/Granule_98.morph.xml
Demos/neuroml/LIF/FvsI_LIF.py
Demos/neuroml/LIF/LIFinject.net.xml
Demos/neuroml/LIF/LIFxml_firing.py
Demos/neuroml/LIF/LIFxml_firing_hsolve.py
Demos/neuroml/LIF/twoLIFs.net.xml
Demos/neuroml/LIF/twoLIFxml_firing.py
Demos/neuroml/LIF/cells_channels/IaF.xml
Demos/neuroml/LIF/cells_channels/LIF.morph.xml
Demos/neuroml/LIF/cells_channels/exc_syn.xml
Demos/neuroml/OlfactoryBulbPassive/OBpassive_numgloms2_seed100.0_decimated.xml
Demos/neuroml/OlfactoryBulbPassive/OBpassive_numgloms3_seed750.0.xml
Demos/neuroml/OlfactoryBulbPassive/OBpassive_slice_numgloms2_seed100.0.xml
Demos/neuroml/OlfactoryBulbPassive/README
Demos/neuroml/OlfactoryBulbPassive/cells/PG.xml
Demos/neuroml/OlfactoryBulbPassive/cells/granule.xml
Demos/neuroml/OlfactoryBulbPassive/cells/mitral.xml
Demos/neuroml/PurkinjeCellPassive/PurkinjePassive.net.xml
Demos/neuroml/PurkinjeCellPassive/README
Demos/neuroml/PurkinjeCellPassive/cells/purk2.morph.xml
Demos/neuroml/allChannelsCell/README
Demos/neuroml/allChannelsCell/allChannelsCell.net.xml
Demos/neuroml/allChannelsCell/allChannelsCell.py
Demos/neuroml/allChannelsCell/cells_channels/Golgi_CaHVA.xml
Demos/neuroml/allChannelsCell/cells_channels/Golgi_CaLVA.xml
Demos/neuroml/allChannelsCell/cells_channels/GranPassiveCond.xml
Demos/neuroml/allChannelsCell/cells_channels/Gran_CaHVA_98.xml
Demos/neuroml/allChannelsCell/cells_channels/Gran_CaPool_98.xml
Demos/neuroml/allChannelsCell/cells_channels/Gran_H_98.xml
Demos/neuroml/allChannelsCell/cells_channels/Gran_KA_98.xml
Demos/neuroml/allChannelsCell/cells_channels/Gran_KCa_98.xml
Demos/neuroml/allChannelsCell/cells_channels/Gran_KDr_98.xml
Demos/neuroml/allChannelsCell/cells_channels/Gran_NaF_98.xml
Demos/neuroml/allChannelsCell/cells_channels/Granule_98.morph.xml
Demos/neuroml/allChannelsCell/cells_channels/Pyramidal_KM.xml
Demos/neuroml/allChannelsCell/cells_channels/Traub_KA.xml
Demos/neuroml/allChannelsCell/cells_channels/Traub_KCaAHP.xml
Demos/neuroml/allChannelsCell/cells_channels/Traub_NaP.xml
Demos/neuroml/allChannelsCell/cells_channels/SolinasEtAl_Golgi/CaHVA_CML.xml
Demos/neuroml/allChannelsCell/cells_channels/SolinasEtAl_Golgi/CaLVA_CML.xml
Demos/neuroml/allChannelsCell/cells_channels/SolinasEtAl_Golgi/Golgi_CALC_CML.xml
Demos/neuroml/allChannelsCell/cells_channels/SolinasEtAl_Golgi/Golgi_CALC_ca2_CML.xml
Demos/neuroml/allChannelsCell/cells_channels/SolinasEtAl_Golgi/KAHP_CML.xml
Demos/neuroml/allChannelsCell/cells_channels/SolinasEtAl_Golgi/KA_CML.xml
Demos/neuroml/allChannelsCell/cells_channels/SolinasEtAl_Golgi/KC_CML.xml
Demos/neuroml/allChannelsCell/cells_channels/SolinasEtAl_Golgi/KV_CML.xml
Demos/neuroml/allChannelsCell/cells_channels/SolinasEtAl_Golgi/Kslow_CML.xml
Demos/neuroml/allChannelsCell/cells_channels/SolinasEtAl_Golgi/NaP_CML.xml
Demos/neuroml/allChannelsCell/cells_channels/SolinasEtAl_Golgi/NaR_CML.xml
Demos/neuroml/allChannelsCell/cells_channels/SolinasEtAl_Golgi/NaT_CML.xml
Demos/neuroml/allChannelsCell/cells_channels/SolinasEtAl_Golgi/Simple_CML.morph.xml
Demos/neuroml/allChannelsCell/cells_channels/SolinasEtAl_Golgi/hcn1f_CML.xml
Demos/neuroml/allChannelsCell/cells_channels/SolinasEtAl_Golgi/hcn1s_CML.xml
Demos/neuroml/allChannelsCell/cells_channels/SolinasEtAl_Golgi/hcn2f_CML.xml
Demos/neuroml/allChannelsCell/cells_channels/SolinasEtAl_Golgi/hcn2s_CML.xml
Demos/neuroml/lobster_pyloric/Generated.net.halfcenter.xml
Demos/neuroml/lobster_pyloric/Generated.net.reverse.xml
Demos/neuroml/lobster_pyloric/Generated.net.xml
Demos/neuroml/lobster_pyloric/STG_net.py
Demos/neuroml/lobster_pyloric/cells/AB_PD.morph.xml
Demos/neuroml/lobster_pyloric/cells/LP.morph.xml
Demos/neuroml/lobster_pyloric/cells/LP_highH.morph.xml
Demos/neuroml/lobster_pyloric/cells/LP_highH2.morph.xml
Demos/neuroml/lobster_pyloric/cells/PY.morph.xml
Demos/neuroml/lobster_pyloric/channels/CaPool_STG.xml
Demos/neuroml/lobster_pyloric/channels/CaS_STG.xml
Demos/neuroml/lobster_pyloric/channels/CaT_STG.xml
Demos/neuroml/lobster_pyloric/channels/H_STG.xml
Demos/neuroml/lobster_pyloric/channels/KA_STG.xml
Demos/neuroml/lobster_pyloric/channels/KCa_STG.xml
Demos/neuroml/lobster_pyloric/channels/Kd_STG.xml
Demos/neuroml/lobster_pyloric/channels/LeakConductance.xml
Demos/neuroml/lobster_pyloric/channels/Na_STG.xml
Demos/neuroml/lobster_pyloric/synapses/AchSyn_STG.py
Demos/neuroml/lobster_pyloric/synapses/DoubExpSyn_Ach.xml
Demos/neuroml/lobster_pyloric/synapses/DoubExpSyn_Glu.xml
Demos/neuroml/lobster_pyloric/synapses/GluSyn_STG.py
Demos/neuroml/lobster_pyloric/synapses/load_synapses.py
Demos/snippets/BCsnippet.py
Demos/snippets/HsolveInstability.py
Demos/snippets/Izhikevich_with_synapse.py
Demos/snippets/Osc.cspace
Demos/snippets/bidirectionalPlasticity.py
Demos/snippets/compartment_net.py
Demos/snippets/compartment_net_no_array.py
Demos/snippets/compartmental_neuron.py
Demos/snippets/crossComptNeuroMesh.py
Demos/snippets/crossComptOscillator.py
Demos/snippets/crossComptSimpleReac.py
Demos/snippets/cspaceSteadyState.py
Demos/snippets/cubeMeshSigNeur.py
Demos/snippets/cylinderDiffusion.py
Demos/snippets/cylinderMotor.py
Demos/snippets/dotp.p
Demos/snippets/fieldelement.py
Demos/snippets/func.py
Demos/snippets/gapjunction.py
Demos/snippets/hdfdemo.py
Demos/snippets/hdfdemo2.py
Demos/snippets/hhcomp.py
Demos/snippets/interpol.py
Demos/snippets/interpol2d.py
Demos/snippets/intfire.py
Demos/snippets/lif.py
Demos/snippets/lifcomp.py
Demos/snippets/loadCspaceModel.py
Demos/snippets/loadKineticModel.py
Demos/snippets/loadKkitObjs.py
Demos/snippets/mgblock.py
Demos/snippets/multiComptSigNeur.py
Demos/snippets/multicomp_lif.py
Demos/snippets/neuronFromDotp.py
Demos/snippets/onetoonemsg.py
Demos/snippets/pulsegen.py
Demos/snippets/reacwithouts1.g
Demos/snippets/recurrentIntFire.py
Demos/snippets/replicasbml11.g
Demos/snippets/run_snippets.py
Demos/snippets/scriptGssaSolver.py
Demos/snippets/scriptGssaVols.py
Demos/snippets/scriptKineticModel.py
Demos/snippets/scriptKineticSolver.py
Demos/snippets/showclocks.py
Demos/snippets/showmsg.py
Demos/snippets/singlemsgcross.py
Demos/snippets/stargazin_synapse.g
Demos/snippets/startstop.py
Demos/snippets/stimtable.py
Demos/snippets/switchKineticSolvers.py
Demos/snippets/symcompartment.py
Demos/snippets/synapse.py
Demos/snippets/synapse_tutorial.py
Demos/snippets/synapse_tutorial_2.ipynb
Demos/snippets/testHsolve.py
Demos/snippets/testSigNeur.py
Demos/snippets/testSteadyState.py
Demos/snippets/threading_demo.py
Demos/snippets/timetable.py
Demos/snippets/traub_naf.py
Demos/snippets/vclamp.py
Demos/snippets/vectors.py
Demos/snippets/wildcard.py
Demos/snippets/MULTI/TuringInNeuron.py
Demos/snippets/MULTI/ca1_asym.p
Demos/snippets/MULTI/diffonly.g
Demos/snippets/MULTI/diffusionOnly.py
Demos/snippets/MULTI/loadMulti.py
Demos/snippets/MULTI/midchan.py
Demos/snippets/MULTI/mincell.p
Demos/snippets/MULTI/mincell2.p
Demos/snippets/MULTI/minchan.py
Demos/snippets/MULTI/minimal.g
Demos/snippets/MULTI/minimal.py
Demos/snippets/MULTI/multi1.py
Demos/snippets/MULTI/multi1_ee.py
Demos/snippets/MULTI/multi2.py
Demos/snippets/MULTI/multi3.py
Demos/snippets/MULTI/proto18.py
Demos/snippets/MULTI/psd_merged30.g
Demos/snippets/MULTI/psd_merged30b.g
Demos/snippets/MULTI/psd_merged31d.g
Demos/snippets/MULTI/runcell18.py
Demos/snippets/MULTI/x_compt.g
Demos/snippets/MULTI/x_compt.py
Demos/squid/README.txt
Demos/squid/channeleditor.py
Demos/squid/electronics.py
Demos/squid/help.html
Demos/squid/help.org
Demos/squid/squid.py
Demos/squid/squid_demo.py
Demos/squid/squid_setup.py
Demos/squid/test_squid.py
Demos/squid/images/navigationtoolbar.jpg
Demos/symcomp/compare_genesis.py
Demos/symcomp/compartments.g
Demos/symcomp/symcomp.g
Demos/symcomp/symcomp.p
Demos/symcomp/symcomp.py
Demos/symcomp/symcomp_readcell.g
Demos/symcomp/symcomp_readcell.py
Demos/traub_2005/README
Demos/traub_2005/nrn/test_ar.hoc
Demos/traub_2005/nrn/test_cad.hoc
Demos/traub_2005/nrn/test_cal.hoc
Demos/traub_2005/nrn/test_cat.hoc
Demos/traub_2005/nrn/test_cat_a.hoc
Demos/traub_2005/nrn/test_deepaxoaxonic.hoc
Demos/traub_2005/nrn/test_deepbasket.hoc
Demos/traub_2005/nrn/test_deeplts.hoc
Demos/traub_2005/nrn/test_k2.hoc
Demos/traub_2005/nrn/test_ka.hoc
Demos/traub_2005/nrn/test_ka_ib.hoc
Demos/traub_2005/nrn/test_kahp.hoc
Demos/traub_2005/nrn/test_kahp_deeppyr.hoc
Demos/traub_2005/nrn/test_kahp_slower.hoc
Demos/traub_2005/nrn/test_kc.hoc
Demos/traub_2005/nrn/test_kc_fast.hoc
Demos/traub_2005/nrn/test_kdr.hoc
Demos/traub_2005/nrn/test_kdr_fs.hoc
Demos/traub_2005/nrn/test_km.hoc
Demos/traub_2005/nrn/test_naf.hoc
Demos/traub_2005/nrn/test_naf2.hoc
Demos/traub_2005/nrn/test_naf2_nRT.hoc
Demos/traub_2005/nrn/test_naf_tcr.hoc
Demos/traub_2005/nrn/test_nap.hoc
Demos/traub_2005/nrn/test_napf.hoc
Demos/traub_2005/nrn/test_napf_ss.hoc
Demos/traub_2005/nrn/test_napf_tcr.hoc
Demos/traub_2005/nrn/test_nontuftedrs.hoc
Demos/traub_2005/nrn/test_nrt.hoc
Demos/traub_2005/nrn/test_singlecomp.hoc
Demos/traub_2005/nrn/test_spinystellate.hoc
Demos/traub_2005/nrn/test_supaxoaxonic.hoc
Demos/traub_2005/nrn/test_supbasket.hoc
Demos/traub_2005/nrn/test_suplts.hoc
Demos/traub_2005/nrn/test_suppyrfrb.hoc
Demos/traub_2005/nrn/test_suppyrrs.hoc
Demos/traub_2005/nrn/test_tcr.hoc
Demos/traub_2005/nrn/test_tcr.old.hoc
Demos/traub_2005/nrn/test_tuftedib.hoc
Demos/traub_2005/nrn/test_tuftedrs.hoc
Demos/traub_2005/nrn/testutils.hoc
Demos/traub_2005/nrn/hoc/utility.hoc
Demos/traub_2005/py/archan.py
Demos/traub_2005/py/benchmark.sh
Demos/traub_2005/py/cachans.py
Demos/traub_2005/py/capool.py
Demos/traub_2005/py/cell_test_util.py
Demos/traub_2005/py/cells.py
Demos/traub_2005/py/channel_test_util.py
Demos/traub_2005/py/channelbase.py
Demos/traub_2005/py/channelinit.py
Demos/traub_2005/py/config.py
Demos/traub_2005/py/custom.ini
Demos/traub_2005/py/deadlock_bug.py
Demos/traub_2005/py/defaults.ini
Demos/traub_2005/py/display_morphology.py
Demos/traub_2005/py/fig_a2_fs.py
Demos/traub_2005/py/fig_a3.py
Demos/traub_2005/py/fig_a4c.py
Demos/traub_2005/py/gui.py
Demos/traub_2005/py/kchans.py
Demos/traub_2005/py/nachans.py
Demos/traub_2005/py/settings.py
Demos/traub_2005/py/test_archan.py
Demos/traub_2005/py/test_cachans.py
Demos/traub_2005/py/test_capool.py
Demos/traub_2005/py/test_deepaxoaxonic.py
Demos/traub_2005/py/test_deepbasket.py
Demos/traub_2005/py/test_deeplts.py
Demos/traub_2005/py/test_hsolve_tcr.py
Demos/traub_2005/py/test_kchans.py
Demos/traub_2005/py/test_nachans.py
Demos/traub_2005/py/test_nontuftedrs.py
Demos/traub_2005/py/test_nrt.py
Demos/traub_2005/py/test_singlecomp.py
Demos/traub_2005/py/test_spinystellate.py
Demos/traub_2005/py/test_supaxoaxonic.py
Demos/traub_2005/py/test_supbasket.py
Demos/traub_2005/py/test_suplts.py
Demos/traub_2005/py/test_suppyrfrb.py
Demos/traub_2005/py/test_suppyrrs.py
Demos/traub_2005/py/test_tcr.py
Demos/traub_2005/py/test_tuftedib.py
Demos/traub_2005/py/test_tuftedrs.py
Demos/traub_2005/py/testutils.py
Demos/traub_2005/py/trbconfig.py
Demos/traub_2005/py/vclamptest.py
Demos/traub_2005/py/proto/DeepAxoaxonic.levels
Demos/traub_2005/py/proto/DeepAxoaxonic.p
Demos/traub_2005/py/proto/DeepBasket.levels
Demos/traub_2005/py/proto/DeepBasket.p
Demos/traub_2005/py/proto/DeepLTS.levels
Demos/traub_2005/py/proto/DeepLTS.p
Demos/traub_2005/py/proto/NontuftedRS.depths
Demos/traub_2005/py/proto/NontuftedRS.levels
Demos/traub_2005/py/proto/NontuftedRS.p
Demos/traub_2005/py/proto/SpinyStellate.levels
Demos/traub_2005/py/proto/SpinyStellate.p
Demos/traub_2005/py/proto/SupAxoaxonic.levels
Demos/traub_2005/py/proto/SupAxoaxonic.p
Demos/traub_2005/py/proto/SupBasket.levels
Demos/traub_2005/py/proto/SupBasket.p
Demos/traub_2005/py/proto/SupLTS.levels
Demos/traub_2005/py/proto/SupLTS.p
Demos/traub_2005/py/proto/SupPyrFRB.depths
Demos/traub_2005/py/proto/SupPyrFRB.levels
Demos/traub_2005/py/proto/SupPyrFRB.p
Demos/traub_2005/py/proto/SupPyrRS.depths
Demos/traub_2005/py/proto/SupPyrRS.levels
Demos/traub_2005/py/proto/SupPyrRS.p
Demos/traub_2005/py/proto/TCR.levels
Demos/traub_2005/py/proto/TCR.p
Demos/traub_2005/py/proto/TuftedIB.levels
Demos/traub_2005/py/proto/TuftedIB.p
Demos/traub_2005/py/proto/TuftedRS.levels
Demos/traub_2005/py/proto/TuftedRS.p
Demos/traub_2005/py/proto/nRT.levels
Demos/traub_2005/py/proto/nRT.p
Demos/tutorials/ChemicalBistables/19085.cspace
Demos/tutorials/ChemicalBistables/bistableVols.py
Demos/tutorials/ChemicalBistables/doseResponse.py
Demos/tutorials/ChemicalBistables/findSteadyState.py
Demos/tutorials/ChemicalBistables/mapkFB.png
Demos/tutorials/ChemicalBistables/mapkFB.py
Demos/tutorials/ChemicalBistables/propBis.png
Demos/tutorials/ChemicalBistables/propagationBis.py
Demos/tutorials/ChemicalBistables/simpleBis.py
Demos/tutorials/ChemicalBistables/strongBis.png
Demos/tutorials/ChemicalBistables/strongBis.py
Demos/tutorials/ChemicalOscillators/Kholodenko_tut.png
Demos/tutorials/ChemicalOscillators/TuringOneDim.py
Demos/tutorials/ChemicalOscillators/relaxOsc_tut.png
Demos/tutorials/ChemicalOscillators/relaxationOsc.py
Demos/tutorials/ChemicalOscillators/repressillator.py
Demos/tutorials/ChemicalOscillators/repressillatorOsc.png
Demos/tutorials/ChemicalOscillators/slowFbOsc.py
Demos/tutorials/ChemicalOscillators/turingPatternTut.png
Demos/util/pymoose.py
Docs/README.txt
Docs/developer/API.txt
Docs/developer/BuildingNewMOOSEClasses.txt
Docs/developer/CodingConventions.txt
Docs/developer/DesignDocument
Docs/developer/Ksolve.txt
Docs/developer/MessageObjectLookup.txt
Docs/developer/PythonRecommendations.org
Docs/developer/ReduceOperations
Docs/developer/Scheduling.txt
Docs/developer/doxygen-API.cpp
Docs/developer/doxygen-design-document.cpp
Docs/developer/doxygen-main.cpp
Docs/developer/doxygen-programmers-guide.cpp
Docs/developer/hsolve-developer-overview.cpp
Docs/developer/hsolve-implementation.cpp
Docs/developer/profiling.cpp
Docs/developer/setget.txt
Docs/developer/the-messaging-system.cpp
Docs/images/KkitModelWindow.png
Docs/images/KkitPlotWindow.png
Docs/images/KkitPoolIcon.png
Docs/images/KkitReacIcon.png
Docs/images/KkitReaction.png
Docs/images/KkitSumTotal.png
Docs/images/MM_EnzIcon.png
Docs/images/MM_EnzReac.png
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basecode/Cinfo.cpp
basecode/Cinfo.h
basecode/Conv.h
basecode/DataElement.cpp
basecode/DataElement.h
basecode/DestFinfo.cpp
basecode/DestFinfo.h
basecode/Dinfo.h
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basecode/GlobalDataElement.cpp
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basecode/HopFunc.cpp
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basecode/OpFunc.h
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biophysics/MarkovChannel.cpp
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ksolve/ZombieReac.cpp
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mpi/proc.cpp
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mpi/proc5.cpp
mpi/testMpi.cpp
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msg/Msg.cpp
msg/Msg.h
msg/OneToAllMsg.cpp
msg/OneToAllMsg.h
msg/OneToOneDataIndexMsg.cpp
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msg/OneToOneMsg.cpp
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msg/SingleMsg.cpp
msg/SingleMsg.h
msg/SparseMsg.cpp
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msg/testMsg.cpp
pymoose/CMakeLists.txt
pymoose/melement.cpp
pymoose/mfield.cpp
pymoose/moosemodule.cpp
pymoose/moosemodule.h
pymoose/pymooseinit.cpp
pymoose/test_moosemodule.cpp
pymoose/vec.cpp
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utility/strutil.cpp
utility/strutil.h
utility/types.cpp
utility/utility.h