COPYING
MANIFEST.in
README
changelog.txt
setup.py
ngs_plumbing.egg-info/PKG-INFO
ngs_plumbing.egg-info/SOURCES.txt
ngs_plumbing.egg-info/dependency_links.txt
ngs_plumbing.egg-info/entry_points.txt
ngs_plumbing.egg-info/not-zip-safe
ngs_plumbing.egg-info/top_level.txt
src/__init__.py
src/_libdna.c
src/_libdna.h
src/_libdna_test.py
src/_libdnaqual.c
src/_libdnaqual_test.py
src/_libxsq.c
src/_libxsq_test.py
src/bam.py
src/bitpack.h
src/colorspace.py
src/dna.py
src/dna_test.py
src/dnaqual.py
src/dnaqual_test.py
src/fasta.py
src/fasta_test.py
src/fastq.py
src/fastq_test.py
src/intervals.py
src/intervals_test.py
src/kmers.py
src/kmers_test.py
src/ngsp_string.py
src/ngsp_string_test.py
src/parsing.py
src/parsing_test.py
src/report.py
src/sampling.py
src/sampling_test.py
src/scons.py
src/tapir.py
src/tests.py
src/xsq.py
src/xsq_test.py
src/xsqconvert.py
src/data/reads.fq
src/data/reads.fq.bz2
src/data/reads.fq.gz
src/data/xsqconvert.xml
src/data/xsqconvert.xml~
src/data/html/readqual.js
src/data/html/readqual.js~
src/data/html/templates/fqlibreport.html
src/data/html/templates/fqlibreport.html~
src/data/html/templates/layout.html~
src/data/html/templates/libreport.html~
src/data/html/templates/xsqlibreport.html
src/data/html/templates/xsqreport.html
src/data/html/templates/xsqreport.html~
src/data/img/logo.png
src/data/test_run/test_run_2012_01_08_Prof_X/result/lane1/test_run_2012_01_08_Prof_X_01.xsq