
version 0.9.0:
^^^^^^^^^^^^^^

* refactored the options for converting XSQ files. Two families of data formats
  can be chosen (FASTA-like or FASTQ-like), and for each either colour-space
  or base-space data can be obtained.

* add new module colorspace, and new script to perform colorspace conversions


version 0.8.2:
^^^^^^^^^^^^^^

* option to convert XSQ files into CSFASTQ files


version 0.8.1:
^^^^^^^^^^^^^^

* Report OS errors when trying to create missing directories for the XSQ reports

* Handle F5 reads in XSQ files when having paired-end RNASeq data

version 0.8.0:
^^^^^^^^^^^^^^

* :func:`_libdna.slicebit2_frombit2bytes` to slice DNA while remaining bitpacked.

* New :func:`kmers.poskmerbit2_frombit2_iter`.

version 0.7.6:
^^^^^^^^^^^^^^

* Fixed HTML QC report when subdirectories were not existing
  (failed to create them)

* QC plots now resized with the window

version 0.7.5:
^^^^^^^^^^^^^^

* Fixed HTML QC report for paired-end runs

* Added parameters maxhead and maxseq to limit the size of the header
  and of the sequence when reading FASTAB files (since there are
  otherwise no checks while reading binary files).

* Fixed HTML QC report when the target directory is already existing
 
version 0.7.4:
^^^^^^^^^^^^^^

* ASCII representation of quality values was incorrect for QUAL files.

* When converting XSQ files, libraries are stored inside directories
  corresponding to the respective XSQ file names.

* fixed anchor in the HTML quality reports

* fixed relative path for the QC values when the HTML report is not generated
  in the current directory ('.')

version 0.7.3:
^^^^^^^^^^^^^^

* ASCII representation of quality values was incorrect for XSQ conversion.
  SOLiD is using the Sanger scoring, not the illumina one.

version 0.7.2:
^^^^^^^^^^^^^^

* XSQ files can be inconsistent in may ways. Attempt at getting more robust
  against that

version 0.7.1:
^^^^^^^^^^^^^^

* new exception fastq.FastqError when problems while parsing FASTQ files

* fixed handling of flag -i for xsq-convert


version 0.7.0:
^^^^^^^^^^^^^^

* functions in _libdna to make the reverse, complement, and reverse complement
  while keeping the DNA bit-packed.

* new methods reversed, complemented, and reversecomplemented for the class dna.PackedDNABytes.

