README.rst
setup.py
peanut/__init__.py
peanut/alignment.cl
peanut/alignment.cpp
peanut/alignment.pxd
peanut/alignment.pyx
peanut/bitencoding.c
peanut/bitencoding.pyx
peanut/common.c
peanut/common.pxd
peanut/common.pyx
peanut/filtration.cl
peanut/filtration.py
peanut/input.c
peanut/input.pyx
peanut/output.cpp
peanut/output.pyx
peanut/postprocessing.cpp
peanut/postprocessing.pxd
peanut/postprocessing.pyx
peanut/query.py
peanut/reference.py
peanut/rescue.c
peanut/rescue.pxd
peanut/rescue.pyx
peanut/stats.py
peanut/utils.py
peanut/validation.cl
peanut/validation.py
peanut/version.py
peanut.egg-info/PKG-INFO
peanut.egg-info/SOURCES.txt
peanut.egg-info/dependency_links.txt
peanut.egg-info/entry_points.txt
peanut.egg-info/requires.txt
peanut.egg-info/top_level.txt
peanut/tests/__init__.py
peanut/tests/tests.py
peanut/tests/trace_mapping.py