Metadata-Version: 1.1
Name: primer3-py
Version: 0.4.1
Summary: Python bindings for Primer3
Home-page: https://github.com/benpruitt/primer3-py
Author: Ben Pruitt, Nick Conway
Author-email: bpruittvt@gmail.com
License: GPLv2
Description: =====================================================
         primer3-py: simple oligo analysis and primer design
        =====================================================
        
        .. image:: https://secure.travis-ci.org/benpruitt/primer3-py.png
          :target: https://travis-ci.org/benpruitt/primer3-py
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          :target: http://www.gnu.org/licenses/gpl-2.0.html
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          :target: https://pypi.python.org/pypi/primer3-py
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          :target: https://pypi.python.org/pypi/primer3-py
        
        
        **Primer3-py** is a Python-abstracted API for the popular Primer3 library. The 
        intention is to provide a simple and reliable interface for automated oligo 
        analysis and design.
        
        Routine oligo analysis is extremely simple::
        
            >>> import primer3 
            >>> primer3.calcTm('GTAAAACGACGGCCAGT')
            49.16808228911765
            >>> primer3.calcHairpin('CCCCCATCCGATCAGGGGG')
            ThermoResult(structure_found=True, tm=34.15, dg=337.09, dh=-36300.00, 
                         ds=-118.13, msg=)
        
        ... and `fast` (**1000X** faster than traditional subprocess wrappers)::
        
            In [1]: import primer3
        
            In [2]: %timeit primer3.calcTm('GTAAAACGACGGCCAGT')
            100000 loops, best of 3: 4.74 µs per loop
        
            In [3]: %timeit primer3.wrappers.calcTm('GTAAAACGACGGCCAGT')
            100000 loops, best of 3: 5.78 ms per loop
        
        **Primer3-py** also includes bindings for the Primer3 `primer design engine` 
        if you'd prefer to use an established pipeline. The IO parameters mirror those
        of the original Primer3, but you don't have to deal with messy and slow file
        IO for your automated workflows.
        
        For complete documentation, see https://benpruitt.github.io/primer3-py
Platform: UNKNOWN
Classifier: Programming Language :: C
Classifier: Programming Language :: Cython
Classifier: Programming Language :: Python
Classifier: Programming Language :: Python :: 2.7
Classifier: Programming Language :: Python :: 3.3
Classifier: Programming Language :: Python :: 3.4
Classifier: Development Status :: 4 - Beta
Classifier: Intended Audience :: Science/Research
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: License :: OSI Approved :: GNU General Public License v2 (GPLv2)
