Metadata-Version: 1.1
Name: rxnconcompiler
Version: 1.0.3
Summary: Systems Biology iterative network building tool
Home-page: None
Author: Magdalena Rother
Author-email: rother.magdalena@gmail.com
License: new BSD
Description: =======================================================================
        rxnconcompiler 
        =======================================================================
        
        rxnconcompiler is an iterative network building tool for Systems Biology.
        
        Magdalena Rother, Sebastian Thieme, Ulrike Muenzner and Marcus Krantz
        
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        LEGAL DISCLAIMER
        
        rxnconcompiler is released under the GPL license, a copy of which 
        is included in the distribution (See COPYING for details). 
        
        This software is provided "as-is". There are no expressed or implied 
        warranties of any kind, including, but not limited to, the warranties of 
        merchantability and fitness for a given application. In no event shall 
        the authors be liable for any direct, indirect, incidental, special, 
        exemplary or consequential damages (including, but not limited to, loss 
        of use, data or profits, or business interruption) however caused and on 
        any theory of liability, whether in contract, strict liability or tort 
        (including negligence or otherwise) arising in any way out of the use 
        of this software, even if advised of the possibility of such damage.
        
        The authors take no responsibility for damage caused by this program 
        or its components. 
        
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        CREDITS
        
        Magdalena Rother   - architecture and unit tests and implementation
        Sebastian Thieme   - model validation and testing
        Ulrike Muenzner    - contribution into concepts
        Marcus Krantz      - concept and supervision
        
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        ACKNOWLEDGEMENTS
        
        Credit goes to our colleagues Falko Krause, Max Floettmann, 
        David Jesinghaus, and Janina Linnik for their comments, 
        ideas and support during development. 
        
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        REFERENCES
        
        Magdalena Rother, Ulrike Muenzner, Sebastian Thieme and Marcus Krantz 
        
        Information content and scalability in signal transduction 
        network reconstruction formats. Molecular BioSystems, 
        DOI: 10.1039/C3MB00005B (2013)
        
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        FOR DEVELOPERS
        
        When using the repository version modify your ~/.bashrc :
        
        PYTHONPATH=$PYTHONPATH:/path/to/main/rxnconcompiler/:
        /path/to/rxnconcompiler/tests/
        export PYTHONPATH
        
        To be able to run acceptance tests with BioNetGen, 
        install the BioNetGen software and add to ~/.bashrc :
        BNG_PATH=/path/to/BioNetGen-2.2.2-stable/
        export BNG_PATH
Platform: UNKNOWN
Classifier: Development Status :: 4 - Beta
Classifier: Programming Language :: Python
