.. Scythe documentation master file, created by
   sphinx-quickstart on Tue May 20 08:09:48 2014.
   You can adapt this file completely to your liking, but it should at least
   contain the root `toctree` directive.

Welcome to Scythe's documentation!
==================================
Scythe -- Selection of Conserved Transcripts by Homology Evaluation

This documentation is under construction!

Contents:

.. toctree::
   :maxdepth: 2

   Introduction

   Tutorial

   Trouble

   Format

   Converters 
 
   ConfigurationFiles

..   Modules

.. Indices and tables
.. ==================
.. * :ref:`genindex`
.. * :ref:`modindex`
.. * :ref:`search`

