MANIFEST.in
setup.py
seqmagick/__init__.py
seqmagick/fileformat.py
seqmagick/transform.py
seqmagick.egg-info/PKG-INFO
seqmagick.egg-info/SOURCES.txt
seqmagick.egg-info/dependency_links.txt
seqmagick.egg-info/entry_points.txt
seqmagick.egg-info/requires.txt
seqmagick.egg-info/top_level.txt
seqmagick/scripts/__init__.py
seqmagick/scripts/cli.py
seqmagick/subcommands/__init__.py
seqmagick/subcommands/backtrans_align.py
seqmagick/subcommands/common.py
seqmagick/subcommands/convert.py
seqmagick/subcommands/extract_ids.py
seqmagick/subcommands/info.py
seqmagick/subcommands/mogrify.py
seqmagick/subcommands/primer_trim.py
seqmagick/subcommands/quality_filter.py
seqmagick/test/__init__.py
seqmagick/test/test_primer_trim.py
seqmagick/test/test_subcommands_backtrans_align.py
seqmagick/test/test_subcommands_common.py
seqmagick/test/test_subcommands_convert.py
seqmagick/test/test_subcommands_quality_filter.py
seqmagick/test/test_transform.py
seqmagick/test/integration/__init__.py
seqmagick/test/integration/test_convert.py
seqmagick/test/integration/test_extract_ids.py
seqmagick/test/integration/test_info.py
seqmagick/test/integration/test_mogrify.py
seqmagick/test/integration/data/__init__.py
seqmagick/test/integration/data/__pycache__
seqmagick/test/integration/data/input1.fasta
seqmagick/test/integration/data/input2.fasta
seqmagick/test/integration/data/input2.fasta.bz2
seqmagick/test/integration/data/input2.fasta.gz
seqmagick/test/integration/data/input3.fasta
seqmagick/test/integration/data/input4_ambig.fasta
seqmagick/test/integration/data/output2.fasta
seqmagick/test/integration/data/output2.nex
seqmagick/test/integration/data/output2.phy
seqmagick/test/integration/data/output2_ungap_cut.fasta
seqmagick/test/integration/data/output3.fasta
seqmagick/test/integration/data/output4.fasta